Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-55 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-55 RM systems
Ref: Duceppe,M.-O. et al. unpublished
REBASE ref # 27136
Contig set: 4,848,196 bp
GenBank #: PYVA00000000 (NZ_PYVA00000000)
REBASE acronym: Sen551
Org_num: 31142
All begin C5I07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23580 | endoribonuclease SymE | |||
| 23585 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen551ORF23590P |
| 23590 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen551ORF23590P |
| 23595 | R | SenC56ORF23565P (100% identity) | GAGNNNNNNRTAYG | Sen551ORF23590P |
| 23600 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10430 | RusA family crossover junction | |||
| 10435 | M | M.StyUK1V (100% identity) | GATC | M.Sen551ORF10435P |
| 10440 | 174 aa hypothetical protein | |||
| 18230 | ribulose-phosphate 3-epimerase | |||
| 18235 | M | M.StyTDamP (100% identity) | GATC | M.Sen551DamP |
| 18240 | cell division protein DamX | |||
| 10180 | drug/metabolite exporter YedA | |||
| 10185 | V | V.StyUK1DcmP (100% identity) | V.Sen551DcmP | |
| 10190 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen551DcmP |
| 10195 | phosphohydrolase | |||
| 17755 | Fis family transcriptional regulator | |||
| 17760 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen551ORF17760P |
| 17765 | DUF2556 domain-containing protein | |||
| 24530 | 62 aa hypothetical protein | |||
| 24535 | M | M.StyUK1ORFAP (100% identity) | M.Sen551ORF24535P | |
| 24540 | 73 aa hypothetical protein | |||
| 23410 | 363 aa hypothetical protein | |||
| 23415 | RM | StyUK1IV (100% identity) | GATCAG | Sen551ORF23415P |
| 23420 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1590 | MFS transporter | |||
| 1595 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen551ORF1595P |
| 1600 | R | StyUK1IP (99% identity) | CAGAG | Sen551ORF1595P |
| 1605 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23595 | type I restriction-modification system | |||
| 23600 | R | StyUK1MrrP (100% identity) | Sen551MrrP | |
| 23605 | 95 aa hypothetical protein | |||