Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-50 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-50 RM systems
Ref: Duceppe,M.-O. et al. unpublished
REBASE ref # 27136
Contig set: 4,849,810 bp
GenBank #: PYUW00000000 (NZ_PYUW00000000)
REBASE acronym: Sen501
Org_num: 31138
All begin C5I02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23585 | endoribonuclease SymE | |||
| 23590 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen501ORF23595P |
| 23595 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen501ORF23595P |
| 23600 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen501ORF23595P |
| 23605 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18220 | ribulose-phosphate 3-epimerase | |||
| 18225 | M | M.StyTDamP (100% identity) | GATC | M.Sen501DamP |
| 18230 | cell division protein DamX | |||
| 10140 | drug/metabolite exporter YedA | |||
| 10145 | V | V.StyUK1DcmP (100% identity) | V.Sen501DcmP | |
| 10150 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen501DcmP |
| 10155 | phosphohydrolase | |||
| 17735 | Fis family transcriptional regulator | |||
| 17740 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen501ORF17740P |
| 17745 | DUF2556 domain-containing protein | |||
| 24535 | 62 aa hypothetical protein | |||
| 24540 | M | M.StyUK1ORFAP (100% identity) | M.Sen501ORF24540P | |
| 24545 | 73 aa hypothetical protein | |||
| 10395 | RusA family crossover junction | |||
| 10400 | M | M.StyUK1V (100% identity) | GATC | M.Sen501ORF10400P |
| 10405 | 174 aa hypothetical protein | |||
| 23415 | 363 aa hypothetical protein | |||
| 23420 | RM | StyUK1IV (100% identity) | GATCAG | Sen501ORF23420P |
| 23425 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1575 | MFS transporter | |||
| 1580 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen501ORF1580P |
| 1585 | R | StyUK1IP (99% identity) | CAGAG | Sen501ORF1580P |
| 1590 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23600 | type I restriction-modification system | |||
| 23605 | R | StyUK1MrrP (100% identity) | Sen501MrrP | |
| 23610 | 95 aa hypothetical protein | |||