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Putative Clostridioides difficile DSM 102859 RM systems
Ref: Riedel,T. et al. Int. J. Med. Microbiol. 307 (6), 311-320 (2017)
REBASE ref # 27454
Complete sequence: 4,247,015 bp
GenBank #: CP020378
REBASE acronym: Cdi102859
Org_num: 31002
All begin CDIF102859_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
577 | conjugative transposon protein | |||
??? | M | M.Cdi21371ORFBP (100% identity) | M.Cdi102859ORF578P | |
579 | S | S.CdiRSS13ORF16830P (100% identity) | S.Cdi102859ORF578P | |
580 | nucleotide-binding protein containing | |||
581 | R | CdiRSS13ORF16830P (100% identity) | Cdi102859ORF578P | |
582 | 78 aa hypothetical protein | |||
3450 | 687 aa hypothetical protein | |||
3451 | R | CdiRSS13ORF3235P (100% identity) | TAAANNNNGRTG | Cdi102859ORF3456P |
3452 | 142 aa hypothetical protein | |||
3453 | 126 aa hypothetical protein | |||
3454 | 102 aa hypothetical protein | |||
3455 | S | S.CdiRSS13ORF3235P (100% identity) | TAAANNNNGRTG | S.Cdi102859ORF3456P |
3456 | M | M.CdiRSS13ORF3235P (100% identity) | TAAANNNNGRTG | M.Cdi102859ORF3456P |
3457 | tagatose-bisphosphate aldolase | |||
3538 | zinc metallopeptidase | |||
3539 | R | CdiRSS13ORF2820P (100% identity) | Cdi102859ORF3542P | |
??? | S | S.Cdi21371ORFFP (100% identity) | S.Cdi102859ORF3542P | |
3541 | DNA-damage-inducible protein D | |||
3542 | M | M.CdiRSS13ORF2820P (100% identity) | M.Cdi102859ORF3542P | |
3543 | 188 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1193 | 99 aa hypothetical protein | |||
1194 | M | M.Cdi102978ORF355P (100% identity) | M.Cdi102859ORF1194P | |
1195 | 73 aa hypothetical protein | |||
2568 | conjugal transfer protein | |||
2569 | M | M.CdiRSS13ORF7540P (100% identity) | M.Cdi102859ORF2569P | |
2570 | DNA-repair protein | |||
3055 | 73 aa hypothetical protein | |||
3056 | M | M.Cdi102978ORF355P (100% identity) | M.Cdi102859ORF3056P | |
3057 | 91 aa hypothetical protein | |||
3158 | phospholipase | |||
3159 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi102859ORF3159P |
3160 | badm/rrf2 family transcriptional regulator | |||
4080 | 89 aa hypothetical protein | |||
4081 | R | CdiRSS13ORF205P (100% identity) | Cdi102859ORF4082P | |
4082 | M | M.CdiRSS13ORF205P (100% identity) | M.Cdi102859ORF4082P | |
4083 | ATP-dependent endonuclease | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
2350 | sigma-54-dependent transcriptional regulator | |||
2351 | R | CdiRSS13McrCP (100% identity) | Cdi102859McrCP | |
2352 | R | CdiRSS13McrBP (100% identity) | Cdi102859McrBP | |
2353 | cell division protein FtsZ |