Stenotrophomonas rhizophila GA1 |
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Putative Stenotrophomonas rhizophila GA1 RM systems
Ref: Zhou,J. unpublished
REBASE ref # 27398
| Sequence length: | GenBank #: | |
| Chromosome: | 5,929,188 bp | CP031729 |
| plasmid unnamed1: | 314,972 bp | CP031730 |
| plasmid unnamed2: | 88,392 bp | CP031731 |
| plasmid unnamed3: | 265,994 bp | CP031732 |
REBASE acronym: SrhGA1
Org_num: 30854
All begin DZC31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24370 | 351 aa hypothetical protein | |||
| 24375 | R | SrhKC1ORFGP (100% identity) | SrhGA1ORF24380P | |
| 24380 | M | M.SrhKC1ORFGP (96% identity) | M.SrhGA1ORF24380P | |
| 24385 | S | S2.SrhKC1ORFGP (64% identity) | S.SrhGA1ORF24380P | |
| 24390 | DUF726 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10110 | MerR family transcriptional regulator | |||
| 10120 | R | SrhKC1ORFBP (100% identity) | SrhGA1ORF10125P | |
| 10125 | M | M.SrhKC1ORFBP (99% identity) | M.SrhGA1ORF10125P | |
| 10130 | 203 aa hypothetical protein | |||
| 18650 | 121 aa hypothetical protein | |||
| 18655 | M | M.SrhKC1ORFEP (100% identity) | M.SrhGA1ORF18655P | |
| 18660 | 89 aa hypothetical protein | |||
| 21395 | ribonucleotide-diphosphate reductase subunit | |||
| 21400 | RM | SrhKC1ORFIP (100% identity) | SrhGA1ORF21400P | |
| 21405 | 69 aa hypothetical protein | |||
| 24275 | helix-turn-helix domain-containing protein | |||
| 24280 | RM | Psp9349ORF24895P (77% identity) | SrhGA1ORF24280AP | |
| 24285 | IS3 family transposase | |||
| 24290 | RM | lactate dehydrogenase | SrhGA1ORF24280BP | |
| 24295 | DEAD/DEAH box helicase | |||
| 26385 | 0 aa hypothetical protein | |||
| 26390 | M | M.SrhKC1ORFFP (100% identity) | M.SrhGA1ORF26390P | |
| 26395 | phage portal protein | |||
| plasmid unnamed1 | ||||
| 29695 | GHKL domain-containing protein | |||
| 29700 | M | M.SrhKC1ORFDP (96% identity) | M.SrhGA1ORF29700P | |
| 29705 | 477 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 30160 | 215 aa hypothetical protein | |||
| 30165 | M | M.SrhKC1ORFCP (100% identity) | M.SrhGA1ORF30165P | |
| 30170 | 113 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 31200 | recombination-associated protein RdgC | |||
| 31205 | M | M.SrhKC1ORFHP (100% identity) | M.SrhGA1ORF31205P | |
| 31210 | 107 aa hypothetical protein | |||