Shigella boydii ATCC 35965 |
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Putative Shigella boydii ATCC 35965 RM systems
Ref: Kim,J.Y. et al. unpublished
REBASE ref # 27021
GenBank #: PSSR00000000
REBASE acronym: Sbo35965
Org_num: 30132
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3902 | type I restriction-modification system endonuclease | |||
| 3904 | S | S.Sbo600690ORF3830P (100% identity) | RTCANNNNNNNNRTRTC | S.Sbo35965II |
| 3906 | M | M.Sdy49345I (100% identity) | RTCANNNNNNNNRTRTC | M.Sbo35965II |
| 3909 | R | Sbo9733IP (100% identity) | RTCANNNNNNNNRTRTC | Sbo35965IIP |
| 3912 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 122 | 97 aa hypothetical protein SF285071_2316 | |||
| 123 | M | M.Sbo35965ORFBP (100% identity) | M.Sbo35965ORFEP | |
| 125 | 98 aa hypothetical protein | |||
| 177 | IS30, transposase | |||
| 180 | M | methylase | M.Sbo35965ORFFP | |
| 184 | Uncharacterised protein | |||
| 333 | tRNA-dihydrouridine synthase B | |||
| 335 | M | M.Sbo9733ORFDP (100% identity) | ATGCAT | M.Sbo35965ORFAP |
| 336 | 59 aa hypothetical protein SFxv_3614 | |||
| 635 | Tryptophan--tRNA ligase | |||
| 636 | M | M.Sbo9733DamP (100% identity) | GATC | M.Sbo35965Dam |
| 639 | cell division protein DamX | |||
| 2075 | HD domain protein | |||
| 2076 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Sbo35965DcmP |
| 2078 | V | V.Sdy49550DcmP (100% identity) | V.Sbo35965DcmP | |
| 2081 | transmembrane subunit | |||
| 3530 | Ile repressor | |||
| 3531 | M | M.Sbo9734ORFCP (99% identity) | M.Sbo35965ORFDP | |
| 3532 | 71 aa hypothetical protein AD31_3131 | |||
| 8977 | 98 aa hypothetical protein | |||
| 8979 | M | M.Sbo35965ORFEP (100% identity) | M.Sbo35965ORFBP | |
| 8981 | 97 aa hypothetical protein SF285071_2316 | |||