Shigella boydii ATCC 12034 |
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Putative Shigella boydii ATCC 12034 RM systems
Ref: Kim,J.Y. et al. unpublished
REBASE ref # 27021
GenBank #: PSSP00000000
REBASE acronym: Sbo12034
Org_num: 30131
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11956 | type I restriction-modification system endonuclease | |||
| 11958 | S | S.Sdy49345I (100% identity) | RTCANNNNNNNNRTRTC | S.Sbo12034II |
| 11960 | M | M.Sdy49345I (100% identity) | RTCANNNNNNNNRTRTC | M.Sbo12034II |
| 11963 | R | Sdy49345IP (100% identity) | RTCANNNNNNNNRTRTC | Sbo12034IIP |
| 11966 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1439 | HD domain protein | |||
| 1440 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Sbo12034DcmP |
| 1442 | V | V.Sdy49550DcmP (100% identity) | V.Sbo12034DcmP | |
| 1445 | transmembrane subunit | |||
| 8591 | tRNA-dihydrouridine synthase B | |||
| ??? | M | M.Sdy49345ORFDP (99% identity) | M.Sbo12034ORFCP | |
| 8598 | 59 aa hypothetical protein SFxv_3614 | |||
| 8980 | cell division protein DamX | |||
| 8983 | M | M.SsoST152DamP (100% identity) | GATC | M.Sbo12034Dam |
| 8985 | Tryptophan--tRNA ligase | |||