Shigella boydii 65-6310 |
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Putative Shigella boydii 65-6310 RM systems
Ref: Kim,J. et al. unpublished
REBASE ref # 27021
GenBank #: PTES00000000
REBASE acronym: Sbo656310
Org_num: 30129
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2100 | 76 aa hypothetical protein | |||
| ??? | R | Sdy9764IP (100% identity) | GGANNNNNNCTTT | Sbo656310IIP |
| 2107 | M | M.Sso30807I (100% identity) | GGANNNNNNCTTT | M.Sbo656310II |
| 2109 | S | S.Sbo1247I (100% identity) | GGANNNNNNCTTT | S.Sbo656310II |
| 2110 | 284 aa hypothetical protein ECDEC13E_3461 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 518 | 68 aa hypothetical protein | |||
| 519 | M | M.Sdy9764ORFHP (100% identity) | A | M.Sbo656310ORFEP |
| 521 | DNA methylase | |||
| 532 | 90 aa hypothetical protein | |||
| ??? | M | M.Sdy9764ORFGP (100% identity) | GATC | M.Sbo656310I |
| 541 | unnamed protein product | |||
| 652 | 64 aa hypothetical protein | |||
| 653 | M | M.Sdy9764ORFAP (100% identity) | M.Sbo656310ORFAP | |
| 656 | IS4 orf | |||
| 4975 | tRNA-dihydrouridine synthase B | |||
| 4977 | M | M.Sfl714ORF2095P (100% identity) | ATGCAT | M.Sbo656310ORFBP |
| 4978 | 59 aa hypothetical protein SFxv_3614 | |||
| 5093 | 68 aa hypothetical protein | |||
| ??? | M | M.SboBSORF1263P (100% identity) | M.Sbo656310ORFCP | |
| 5103 | DNA methylase | |||
| 5309 | Tryptophan--tRNA ligase | |||
| 5310 | M | M.UbaC1152DamP (100% identity) | M.Sbo656310DamP | |
| 5313 | cell division protein DamX | |||
| 5727 | HD domain protein | |||
| 5728 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.Sbo656310DcmP |
| 5730 | V | V.Sso8361DcmP (100% identity) | V.Sbo656310DcmP | |
| 5734 | transmembrane subunit | |||