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Putative Aeromonas caviae T25-39 RM systems
Ref: Shi,Y. et al. J Environ Sci (China) (2018) In press
REBASE ref # 26767
Sequence length: | GenBank #: | |
Chromosome: | 4,650,143 bp | CP025706 |
plasmid pAeca1-b: | 221,458 bp | CP039627 |
REBASE acronym: Aca2539
Org_num: 29425
All begin C1C91_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5 | ISL3 family transposase | |||
10 | R | AmeR5022ORF21625P (99% identity) | GACNNNNNNCGT | Aca2539ORF20P |
15 | S | S.AmeR5022ORF21625P (99% identity) | GACNNNNNNCGT | S.Aca2539ORF20P |
20 | M | M.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | M.Aca2539ORF20P |
25 | YchE family NAAT transporter | |||
45 | two-component system response regulator BtsR | |||
50 | M | M.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | M.Aca2539ORF50P |
55 | S | S.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | S.Aca2539ORF50P |
60 | R | AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | Aca2539ORF50P |
65 | ISL3 family transposase | |||
3665 | alpha/beta hydrolase | |||
3670 | M | M.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | M.Aca2539ORF3670P |
3675 | S | S.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | S.Aca2539ORF3670P |
3680 | R | AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | Aca2539ORF3670P |
3685 | ISL3 family transposase | |||
8500 | helix-turn-helix transcriptional regulator | |||
8505 | R | AcaR252IIP (100% identity) | CACNNNNNNCTTT | Aca2539IP |
8510 | ATP-binding protein | |||
8515 | M | M.AcaR252II (100% identity) | CACNNNNNNCTTT | M.Aca2539I |
8520 | S | S.AcaR252II (100% identity) | CACNNNNNNCTTT | S.Aca2539I |
8525 | SIR2 family protein | |||
16915 | ISL3 family transposase | |||
16920 | R | AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | Aca2539ORF16930P |
16925 | S | S.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | S.Aca2539ORF16930P |
16930 | M | M.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | M.Aca2539ORF16930P |
16935 | glycine cleavage system aminomethyltransferase | |||
17760 | ISL3 family transposase | |||
17765 | R | AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | Aca2539ORF17775P |
17770 | S | S.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | S.Aca2539ORF17775P |
17775 | M | M.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | M.Aca2539ORF17775P |
17780 | J domain-containing protein | |||
19880 | IS21-like element ISAs27 family transposase | |||
19885 | R | AcaR252IP (100% identity) | CAGNNNNNNCTAY | Aca2539IIP |
22190 | 189 aa hypothetical protein | |||
22195 | 96 aa hypothetical protein | |||
19890 | IS630 family transposase | |||
19895 | PD-(D/E)XK nuclease family protein | |||
19900 | S | S.AcaR252I (100% identity) | CAGNNNNNNCTAY | S.Aca2539II |
19905 | M | M.AcaR252I (100% identity) | CAGNNNNNNCTAY | M.Aca2539II |
19910 | toprim domain-containing protein | |||
21750 | 6-carboxytetrahydropterin synthase | |||
21755 | M | M.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | M.Aca2539ORF21755P |
21760 | S | S.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | S.Aca2539ORF21755P |
21765 | R | AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | Aca2539ORF21755P |
21770 | ISL3 family transposase | |||
plasmid pAeca1-b | ||||
22350 | ISL3 family transposase | |||
22355 | R | AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | Aca2539ORF22365P |
22360 | S | S.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | S.Aca2539ORF22365P |
22365 | M | M.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | M.Aca2539ORF22365P |
22370 | fluoroquinolone-acetylating aminoglycoside | |||
22705 | 183 aa hypothetical protein | |||
22710 | M | M.SmaY426ORF10P (100% identity) | CACNNNNNNNTCGC | M.Aca2539III |
22715 | DUF1016 domain-containing protein | |||
22720 | S | S.Ecl93bORF4657P (67% identity) | CACNNNNNNNTCGC | S.Aca2539III |
22725 | R | AmeR5022ORF23120P (100% identity) | CACNNNNNNNTCGC | Aca2539IIIP |
22730 | ISL3-like element ISSm4 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2640 | ribulose-phosphate 3-epimerase | |||
2645 | M | M.Asp1406DamP (100% identity) | GATC | M.Aca2539Dam |
2650 | SPOR domain-containing protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
865 | hypothetical protein | |||
870 | R | AcaR256ORF20260P (36% identity) | Aca2539ORF870P | |
875 | histidine phosphatase family protein | |||
17835 | class I SAM-dependent methyltransferase | |||
17840 | R | AcaR252ORF8165P (100% identity) | Aca2539ORF17840P | |
17845 | J domain-containing protein |