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Putative Haemophilus influenzae NCTC12975 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Complete sequence: 1,850,791 bp
GenBank #: LS483438
REBASE acronym: Hin12975
Org_num: 29598
All begin NCTC12975_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
830 | inner membrane protein | |||
831 | R | HinP3EMOORF7185P (100% identity) | GCANNNNNNNTTC | Hin12975IIP |
832 | DNA binding protein | |||
833 | anticodon nuclease | |||
834 | S | S.HinP3EMOORF7185P (100% identity) | GCANNNNNNNTTC | S.Hin12975II |
835 | M | M.HinP3EMOORF7185P (100% identity) | GCANNNNNNNTTC | M.Hin12975II |
836 | oligopeptidase A | |||
949 | Signal Recognition Particle (SRP) component with | |||
950 | R | HinII3ORF8910P (100% identity) | ATGNNNNNNCCT | Hin12975IP |
951 | S | S.HinP3EMOORF6585P (100% identity) | ATGNNNNNNCCT | S.Hin12975I |
952 | transcriptional regulator containing an hth | |||
953 | M | M.HinP3EMOORF6585P (100% identity) | ATGNNNNNNCCT | M.Hin12975I |
954 | NIF3-like protein | |||
1281 | translation initiation factor IF-2 | |||
1282 | R | HinP3EMOORF3665P (100% identity) | Hin12975ORF1285P | |
1283 | Uncharacterised protein | |||
1284 | S | S.HinP3EMOORF3665P (100% identity) | S.Hin12975ORF1285P | |
??? | M | M.Hin403ORF7195P (100% identity) | M.Hin12975ORF1285P | |
1286 | 30s ribosome binding factor | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1327 | condesin subunit F | |||
1328 | M | M.HinKR271ORF1213P (100% identity) | RGCGCY | M.Hin12975ORF1328P |
1329 | R | HinP3EMOORF3885P (100% identity) | RGCGCY | Hin12975ORF1328P |
1330 | protein involved in chromosome partitioning | |||
1350 | valyl-tRNA synthetase | |||
1351 | M | M.HinIII8ORF12360P (100% identity) | AAGCTT | M.Hin12975III |
1352 | R | HinIII8ORF12360P (100% identity) | AAGCTT | Hin12975IIIP |
1353 | ASCH domain | |||
1389 | Uncharacterised protein | |||
1390 | M | M.HinP3EMOORF4195P (100% identity) | M.Hin12975ORF1390P | |
1391 | Uncharacterised protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1780 | ribonuclease HII, degrades RNA of DNA-RNA | |||
1781 | M | M.HinII3ORF16980P (100% identity) | CAKAC | M.Hin12975V |
1782 | R | HinII7ORF17560P (100% identity) | CAKAC | Hin12975VP |
1783 | alkylhydroperoxidase | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
840 | phosphatidylglycerophosphatase B | |||
841 | M | M.HinP3EMOORF7155P (100% identity) | GATC | M.Hin12975IV |
842 | 3-dehydroquinate synthase |