Salmonella enterica subsp. enterica serovar Corvallis 12-01738 |
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Putative Salmonella enterica subsp. enterica serovar Corvallis 12-01738 RM systems
Ref: Hadziabdic,S. et al. unpublished
REBASE ref # 27212
| Sequence length: | GenBank #: | |
| Chromosome: | 4,887,378 bp | CP027677 |
| plasmid pSE12-01738-1: | 284,485 bp | CP027678 |
| plasmid pSE12-01738-2: | 177,190 bp | CP027679 |
REBASE acronym: Sen1738
Org_num: 28952
All begin C7D56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5680 | 322 aa hypothetical protein | |||
| 5685 | R | Sen79107ORF19880P (100% identity) | GAAYNNNNNNNCTGG | Sen1738ORF5690P |
| 5690 | M | M.Sen79107ORF19880P (100% identity) | GAAYNNNNNNNCTGG | M.Sen1738ORF5690P |
| 5695 | S | S.Sen79107ORF19880P (100% identity) | GAAYNNNNNNNCTGG | S.Sen1738ORF5690P |
| 5700 | endoribonuclease SymE | |||
| 5970 | toll/interleukin-1 receptor domain-containing | |||
| 5975 | M | M.Sen79107ORF20145P (100% identity) | M.Sen1738ORF5975P | |
| 5980 | S | S.Sen79107ORF20145P (100% identity) | S.Sen1738ORF5975P | |
| 5985 | R | Sen79107ORF20145P (100% identity) | Sen1738ORF5975P | |
| 5990 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 185 | endonuclease | |||
| 190 | M | M.Sen79107ORF14955P (100% identity) | GATC | M.Sen1738ORF190P |
| 195 | 75 aa hypothetical protein | |||
| 2060 | NinE family protein | |||
| 2065 | M | M.EfeC08ORF12755P (99% identity) | GATC | M.Sen1738ORF2065P |
| 2070 | 140 aa hypothetical protein | |||
| 5855 | 68 aa hypothetical protein | |||
| 5860 | R | Sen79107ORF20035P (100% identity) | Sen1738ORF5865P | |
| 5865 | M | M.Sen59903ORF8455P (100% identity) | M.Sen1738ORF5865P | |
| 5870 | DNA helicase | |||
| 6010 | 69 aa hypothetical protein | |||
| 6015 | R | Sen406ORFGP (100% identity) | GAAC | Sen1738ORF6015P |
| 6020 | DUF4102 domain-containing protein | |||
| 8340 | DUF262 domain-containing protein | |||
| 8345 | R | SspS13ORF1655P (100% identity) | Sen1738ORF8350P | |
| 8350 | M | M.SspS13ORF1655P (100% identity) | M.Sen1738ORF8350P | |
| 8355 | replication endonuclease | |||
| 11385 | cell division protein DamX | |||
| 11390 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen1738DamP |
| 11395 | ribulose-phosphate 3-epimerase | |||
| 11890 | DUF2556 domain-containing protein | |||
| 11895 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen1738ORF11895P |
| 11900 | Fis family transcriptional regulator | |||
| 12830 | DUF2732 domain-containing protein | |||
| 12835 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen1738ORF12835P | |
| 12840 | replication endonuclease | |||
| 19360 | phosphohydrolase | |||
| 19365 | M | M.Sen79107DcmP (100% identity) | CCWGG | M.Sen1738DcmP |
| 19370 | V | V.StyUK1DcmP (100% identity) | V.Sen1738DcmP | |
| 19375 | drug/metabolite exporter YedA | |||
| plasmid pSE12-01738-1 | ||||
| 25430 | ABC transporter | |||
| 25435 | M | M.Ssp15303ORFDP (100% identity) | M.Sen1738ORF25435P | |
| 25440 | 202 aa hypothetical protein | |||
| 25565 | DNA-binding protein | |||
| 25570 | M | M.Ssp15303ORFEP (100% identity) | M.Sen1738ORF25570P | |
| 25575 | 284 aa hypothetical protein | |||
| 26435 | DUF1173 domain-containing protein | |||
| 26440 | M | M.Ssp15303DcmP (100% identity) | M.Sen1738Dcm2P | |
| 26445 | nuclease | |||
| plasmid pSE12-01738-2 | ||||
| 27095 | 158 aa hypothetical protein | |||
| 27100 | M | M.YrupYR1ORFCP (100% identity) | M.Sen1738ORF27100P | |
| 27105 | 100 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3225 | 33 aa hypothetical protein | |||
| 3230 | R | SenS051ORF18250P (100% identity) | CAGAG | Sen1738ORF3235P |
| 3235 | M | M.SenUA38ORF1080P (100% identity) | CAGAG | M.Sen1738ORF3235P |
| 3240 | MFS transporter | |||