Bifidobacterium species TRE D |
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Putative Bifidobacterium species TRE D RM systems
Ref: Mattarelli,P. et al. unpublished
REBASE ref # 26019
Contig set: 2,652,139 bp
GenBank #: PGLQ00000000 (NZ_PGLQ00000000)
REBASE acronym: BspTRED
Org_num: 28279
All begin CUU80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1510 | two-component sensor histidine kinase | |||
| 1515 | R | BimTam1GORF1747P (96% identity) | BspTREDORF1520P | |
| 1520 | M | M.Bca31790ORF4240P (98% identity) | M.BspTREDORF1520P | |
| 1525 | S | S1.BloK2214ORF4510P (39% identity) | S1.BspTREDORF1520P | |
| 1530 | S | S2.BimTam1GORF1747P (84% identity) | S2.BspTREDORF1520P | |
| 1535 | integrase | |||
| ??? | S | S.BaeTRE17ORF1625P (50% identity) | S3.BspTREDORF1520P | |
| 1545 | multidrug ABC transporter permease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10545 | RM | BimTam1GORF2149P (90% identity) | BspTREDORF10545P | |
| 10550 | AbrB/MazE/SpoVT family DNA-binding | |||
| 9595 | pilus assembly protein TadE | |||
| 9600 | M | M.Bsa23967ORFAP (65% identity) | M.BspTREDORF9600P | |
| 9605 | R | Bsa23967ORFAP (78% identity) | BspTREDORF9600P | |
| 9610 | diacylglycerol kinase | |||
| 6825 | AAA family ATPase | |||
| 6830 | M | M.BspTRI7ORF6995P (80% identity) | M.BspTREDORF6830P | |
| 6835 | type III restriction endonuclease subunit R | |||
| 4415 | ABC transporter substrate-binding protein | |||
| 4420 | R | BpaUis4EORF853P (83% identity) | BspTREDORF4425P | |
| 4425 | M | M.BpaUis4EORF853P (78% identity) | M.BspTREDORF4425P | |
| 4430 | ABC transporter permease | |||
| 4545 | XRE family transcriptional regulator | |||
| 4550 | RM | Gva37ORF4525P (66% identity) | BspTREDORF4550P | |
| 4555 | dihydroxy-acid dehydratase | |||
| 1825 | 636 aa hypothetical protein | |||
| 1830 | RM | Blo5934ORF4385P (60% identity) | BspTREDORF1830P | |
| 1835 | 104 aa hypothetical protein | |||