Salmonella enterica subsp. enterica serovar Typhimurium UPM 260 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium UPM 260 RM systems
Ref: Roslan,N.S. unpublished
REBASE ref # 25982
Contig set: 4,864,264 bp
GenBank #: NQWC00000000 (NZ_NQWC00000000)
REBASE acronym: SenUPM260
Org_num: 28261
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 68 | methylated adenine and cytosine restriction protein | |||
| 71 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenUPM260ORFEP |
| 77 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenUPM260ORFEP |
| 83 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenUPM260ORFEP |
| 84 | 93 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16 | antitermination protein | |||
| 17 | M | M.SenWT7ORF14585P (100% identity) | M.SenUPM260ORFGP | |
| 18 | AAA ATPase domain protein | |||
| 31 | phage recombination protein Bet | |||
| 34 | M | M.Ssp15303ORFFP (100% identity) | GATC | M.SenUPM260ORFCP |
| 36 | Bacteriophage protein | |||
| 26 | DamX protein | |||
| 28 | M | M.StyTDamP (100% identity) | GATC | M.SenUPM260DamP |
| 29 | Tryptophan--tRNA ligase | |||
| 20 | 102 aa hypothetical protein | |||
| 23 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenUPM260ORFDP |
| 25 | tRNA-dihydrouridine synthase B | |||
| 78 | 147 aa hypothetical protein | |||
| 80 | M | M.CspMGH105ORFKP (97% identity) | M.SenUPM260ORFAP | |
| 81 | 104 aa hypothetical protein | |||
| 82 | YedA | |||
| 83 | V | V.StyUK1DcmP (100% identity) | V.SenUPM260DcmP | |
| 84 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenUPM260DcmP |
| 86 | 91 aa hypothetical protein | |||
| 1193 | 363 aa hypothetical protein | |||
| 1195 | RM | StyUK1IV (100% identity) | GATCAG | SenUPM260ORFFP |
| 1198 | 106 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 638 | 71 aa hypothetical protein SEHO0A_00325 | |||
| 639 | R | SenZYXORFDP (100% identity) | CAGAG | SenUPM260ORFBP |
| 641 | M | M.SenWT7II (100% identity) | CAGAG | M.SenUPM260ORFBP |
| 642 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 67 | 62 aa hypothetical protein | |||
| 68 | R | StyUK1MrrP (100% identity) | SenUPM260MrrP | |
| 71 | type I restriction-modification system deoxyribonuclease | |||