Salmonella enterica subsp. enterica serovar Stanleyville CFSAN059882 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Stanleyville CFSAN059882 RM systems
Ref: Fashae,K. unpublished
REBASE ref # 25835
Contig set: 4,697,783 bp
GenBank #: NPMH00000000 (NZ_NPMH00000000)
REBASE acronym: Sen59882
Org_num: 28128
All begin CCO39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5195 | restriction endonuclease | |||
| 5200 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen59882ORF5205P |
| 5205 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen59882ORF5205P |
| 5210 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen59882ORF5205P |
| 5215 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 50 | DUF2556 domain-containing protein | |||
| 55 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen59882ORF55P |
| 60 | Fis family transcriptional regulator | |||
| 8025 | DNA cytosine methyltransferase | |||
| 8030 | V | V.StyTDcmP (100% identity) | V.Sen59882DcmP | |
| 8035 | drug/metabolite exporter YedA | |||
| 15390 | cell division protein DamX | |||
| 15395 | M | M.StyTDamP (100% identity) | GATC | M.Sen59882DamP |
| 15400 | ribulose-phosphate 3-epimerase | |||
| 5395 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen59882ORF5395P |
| 5400 | ATP-dependent helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11380 | 33 aa hypothetical protein | |||
| 11385 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen59882ORF11390P |
| 11390 | M | M.SenC2217ORF18390P (100% identity) | CAGAG | M.Sen59882ORF11390P |
| 11395 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5190 | 95 aa hypothetical protein | |||
| 5195 | R | StyUK1MrrP (100% identity) | Sen59882MrrP | |
| 5200 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8020 | phosphohydrolase | |||
| 8025 | M | M.SenST01ORF6245P (100% identity) | CCWGG | M.Sen59882ORF8025P |
| 8030 | very short patch repair endonuclease | |||