Prevotella intermedia WW414 |
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Putative Prevotella intermedia WW414 RM systems
Ref: Haigh,R.D. et al. unpublished
REBASE ref # 25831
Contig set: 2,620,156 bp
GenBank #: NSMA00000000 (NZ_NSMA00000000)
REBASE acronym: PinWW414
Org_num: 28105
All begin CLI69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5815 | helicase | |||
| 5820 | C | C.Pin2836ORF11600P (100% identity) | C.PinWW414ORF5835P | |
| 5825 | R | Pti22865ORFDP (97% identity) | PinWW414ORF5835P | |
| 5830 | 215 aa hypothetical protein | |||
| 5835 | M | M.Pin2834ORF11205P (98% identity) | M.PinWW414ORF5835P | |
| 5840 | cell filamentation protein Fic | |||
| 5845 | S | S4.Bov926ORF5895P (78% identity) | S1.PinWW414ORF5835P | |
| 5850 | S | S4.PinWW855ORF6635P (46% identity) | S2.PinWW414ORF5835P | |
| 5855 | S | S1.PinWW855ORF6635P (45% identity) | S3.PinWW414ORF5835P | |
| 5860 | S | S4.Pin2734IIP (72% identity) | S4.PinWW414ORF5835P | |
| 5865 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11425 | polyketide cyclase | |||
| 11430 | M | M.PinWW414ORF4330P (100% identity) | M.PinWW414ORF11430P | |
| 11435 | R | PinWW414ORF4330P (100% identity) | PinWW414ORF11430P | |
| 11440 | transposase | |||
| 3165 | 170 aa hypothetical protein | |||
| 3170 | M | M.Pin2734ORF7265P (100% identity) | M.PinWW414ORF3170P | |
| 3175 | 107 aa hypothetical protein | |||
| 9360 | prolipoprotein diacylglyceryl transferase | |||
| 9365 | M | M.Pin2838ORF8245P (100% identity) | M.PinWW414ORF9365P | |
| 9370 | R | Pin2838ORF8245P (100% identity) | PinWW414ORF9365P | |
| 9375 | 65 aa hypothetical protein | |||
| 8495 | mobilization protein | |||
| 8500 | RM | Pin2069ORF7465P (99% identity) | PinWW414ORF8500P | |
| 8510 | 141 aa hypothetical protein | |||
| 615 | 293 aa hypothetical protein | |||
| 620 | R | Pin2834ORF8735P (99% identity) | GATC | PinWW414ORF625P |
| 625 | M | M.Pin2834ORF8735P (97% identity) | GATC | M.PinWW414ORF625P |
| 630 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |||
| 4250 | nucleoid-associated protein NdpA | |||
| 4255 | C | C.PmeBin223ORFAP (98% identity) | C.PinWW414ORF4265P | |
| 4260 | R | PmeBin223ORFAP (92% identity) | PinWW414ORF4265P | |
| 4265 | M | M.PmeBin223ORFAP (97% identity) | M.PinWW414ORF4265P | |
| 4270 | 130 aa hypothetical protein | |||
| 4325 | polyketide cyclase | |||
| 4330 | M | M.PinWW414ORF11430P (100% identity) | M.PinWW414ORF4330P | |
| 4335 | R | PinWW414ORF11430P (100% identity) | PinWW414ORF4330P | |
| 4340 | transposase | |||