Salmonella enterica subsp. enterica serovar Virchow NCTR409 |
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Putative Salmonella enterica subsp. enterica serovar Virchow NCTR409 RM systems
Ref: Khan,A. et al. unpublished
REBASE ref # 25813
Contig set: 4,786,725 bp
GenBank #: NQWM00000000 (NZ_NQWM00000000)
REBASE acronym: SenNCTR409
Org_num: 28071
All begin CJZ31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14365 | endoribonuclease SymE | |||
| 14370 | S | S.Sen10533ORF19305P (99% identity) | RAACNNNNNNNGTGG | S.SenNCTR409ORF14375P |
| 14375 | M | M.SenSL491ORF354P (100% identity) | RAACNNNNNNNGTGG | M.SenNCTR409ORF14375P |
| 14380 | R | SenUA13ORF1281P (100% identity) | RAACNNNNNNNGTGG | SenNCTR409ORF14375P |
| 14385 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23350 | DUF2556 domain-containing protein | |||
| 23355 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenNCTR409ORF23355P |
| 23360 | Fis family transcriptional regulator | |||
| 8995 | DNA cytosine methyltransferase | |||
| 9000 | V | V.StyTDcmP (100% identity) | V.SenNCTR409DcmP | |
| 9005 | drug/metabolite exporter YedA | |||
| 750 | 921 aa hypothetical protein | |||
| 755 | M | M.SenUA13ORF2340P (100% identity) | TGGCCA | M.SenNCTR409ORF755P |
| 760 | GNAT family N-acetyltransferase | |||
| 13165 | cell division protein DamX | |||
| 13170 | M | M.StyTDamP (100% identity) | GATC | M.SenNCTR409DamP |
| 13175 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2000 | 33 aa hypothetical protein | |||
| 2005 | R | SenZYXORFDP (99% identity) | CAGAG | SenNCTR409ORF2010P |
| 2010 | M | M.SenWT7II (100% identity) | CAGAG | M.SenNCTR409ORF2010P |
| 2015 | MFS transporter | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8990 | phosphohydrolase | |||
| 8995 | M | M.SenST01ORF6245P (100% identity) | CCWGG | M.SenNCTR409ORF8995P |
| 9000 | very short patch repair endonuclease | |||