Salmonella enterica subsp. enterica serovar Typhimurium NCTR350 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium NCTR350 RM systems
Ref: Khan,A. et al. unpublished
REBASE ref # 25813
Contig set: 4,843,673 bp
GenBank #: NQWV00000000 (NZ_NQWV00000000)
REBASE acronym: SenNCTR350
Org_num: 28068
All begin CJZ28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12495 | endoribonuclease SymE | |||
| 12500 | S | S.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | S.SenNCTR350ORF12505P |
| 12505 | M | M.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | M.SenNCTR350ORF12505P |
| 12510 | R | SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | SenNCTR350ORF12505P |
| 12515 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8985 | M | M.SenUA39ORF5P (21% identity) | M.SenNCTR350ORF8985P | |
| 8990 | R | SenUA39ORF5P (100% identity) | SenNCTR350ORF8985P | |
| 8995 | 0 aa hypothetical protein | |||
| ??? | M | hypothetical protein | M.SenNCTR350ORF24765P | |
| 9025 | plasmid mobilization protein | |||
| 9030 | M | M.SenUA39ORF5P (76% identity) | M.SenNCTR350ORF9030P | |
| 2020 | NinE family protein | |||
| 2025 | M | M.SspA292ORF7010P (99% identity) | M.SenNCTR350ORF2025P | |
| 2030 | protein ninF | |||
| 18250 | DUF2556 domain-containing protein | |||
| 18255 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenNCTR350ORF18255P |
| 18260 | integrase | |||
| 20420 | phosphohydrolase | |||
| 20425 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenNCTR350DcmP |
| 20430 | V | V.StyUK1DcmP (100% identity) | V.SenNCTR350DcmP | |
| 20435 | drug/metabolite exporter YedA | |||
| 23385 | replication endonuclease | |||
| 23390 | M | M.SenUA39ORF1528P (100% identity) | M.SenNCTR350ORF23390P | |
| 23395 | DUF2732 domain-containing protein | |||
| 12310 | ABC transporter ATP-binding protein | |||
| 12315 | RM | SspA292ORF20215P (100% identity) | GAANCAG | SenNCTR350ORF12315P |
| 12320 | DNA repair protein | |||
| 16680 | cell division protein DamX | |||
| 16685 | M | M.StyTDamP (100% identity) | GATC | M.SenNCTR350DamP |
| 16690 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3655 | 33 aa hypothetical protein | |||
| 3660 | R | SspA292ORF17210P (100% identity) | CAGAG | SenNCTR350ORF3665P |
| 3665 | M | M.SspA292ORF17210P (100% identity) | CAGAG | M.SenNCTR350ORF3665P |
| 3670 | MFS transporter | |||