Salmonella enterica subsp. enterica serovar Aberdeen NCTR144 |
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Putative Salmonella enterica subsp. enterica serovar Aberdeen NCTR144 RM systems
Ref: Khan,A. et al. unpublished
REBASE ref # 25813
Contig set: 5,122,857 bp
GenBank #: NQWQ00000000 (NZ_NQWQ00000000)
REBASE acronym: SenNCTR144
Org_num: 28063
All begin CJS40_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17970 | 79 aa hypothetical protein | |||
| 17975 | M | M.SenS334ORF18485P (100% identity) | M.SenNCTR144ORF17975P | |
| 17980 | YqaJ-like viral recombinase | |||
| 26635 | 354 aa hypothetical protein | |||
| 26640 | M | M.StyTORF1926P (95% identity) | M.SenNCTR144ORF26640P | |
| 26645 | DUF4060 domain-containing protein | |||
| 25600 | 73 aa hypothetical protein | |||
| 25605 | M | M.Sens29939ORF25020P (100% identity) | M.SenNCTR144ORF25605P | |
| 25610 | 61 aa hypothetical protein | |||
| 21780 | GntR family transcriptional regulator | |||
| ??? | M | M1.Sens29843ORF22730P (59% identity) | M.SenNCTR144ORF21785P | |
| 21795 | RusA family crossover junction | |||
| 18080 | 194 aa hypothetical protein | |||
| 18085 | M | M.SenS1602ORF16345P (98% identity) | M.SenNCTR144ORF18085P | |
| 18090 | 108 aa hypothetical protein | |||
| 12195 | phosphohydrolase | |||
| 12200 | M | M.Sens29882DcmP (100% identity) | CCWGG | M.SenNCTR144DcmP |
| 12205 | V | V.StyUK1DcmP (100% identity) | V.SenNCTR144DcmP | |
| 12210 | drug/metabolite exporter YedA | |||
| 22190 | Fis family transcriptional regulator | |||
| 22195 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenNCTR144ORF22195P |
| 22200 | DUF2556 domain-containing protein | |||
| 9340 | 73 aa hypothetical protein | |||
| 9345 | M | M.Sen59894ORF19755P (99% identity) | M.SenNCTR144ORF9345P | |
| 9350 | 88 aa hypothetical protein | |||
| 17720 | 80 aa hypothetical protein | |||
| 17725 | M | M.Sens29939ORF10795P (100% identity) | M.SenNCTR144ORF17725P | |
| 17730 | 73 aa hypothetical protein | |||
| 10205 | cell division protein DamX | |||
| 10210 | M | M.StyTDamP (100% identity) | GATC | M.SenNCTR144DamP |
| 10215 | ribulose-phosphate 3-epimerase | |||
| 11310 | 92 aa hypothetical protein | |||
| 11315 | M | M.Sens29882ORF8810P (99% identity) | M.SenNCTR144ORF11315P | |
| 11320 | 179 aa hypothetical protein | |||
| 1675 | integrase | |||
| 1680 | R | SinI (100% identity) | GGWCC | SenNCTR144ORF1685P |
| 1685 | M | M.Sens30601ORF19380P (99% identity) | GGWCC | M.SenNCTR144ORF1685P |
| 1690 | 66 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6170 | 33 aa hypothetical protein | |||
| 6175 | R | SenUA35ORF2225P (100% identity) | CAGAG | SenNCTR144ORF6180P |
| 6180 | M | M.Sens29882ORF18310P (100% identity) | CAGAG | M.SenNCTR144ORF6180P |
| 6185 | MFS transporter | |||