Salmonella enterica subsp. enterica serovar Typhi Rwp1-PK1 |
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Putative Salmonella enterica subsp. enterica serovar Typhi Rwp1-PK1 RM systems
Ref: Gul,D. et al. unpublished
REBASE ref # 25772
Contig set: 4,823,679 bp
GenBank #: NIFP00000000 (NZ_NIFP00000000)
REBASE acronym: SenPK1
Org_num: 27951
All begin CDA57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6310 | 131 aa hypothetical protein | |||
| 6315 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.SenPK1ORFAP |
| 6320 | M | M.StyTORF4575P (88% identity) | GAANNNNNNNNTCGC | M.SenPK1ORFAP |
| 6325 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | SenPK1ORFAP |
| 6330 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22090 | DUF2556 domain-containing protein | |||
| 22095 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenPK1ORF22095P |
| 22100 | Fis family transcriptional regulator | |||
| 23895 | 587 aa hypothetical protein | |||
| 23900 | RM | Sen756ORFFP (100% identity) | ATGAAG | SenPK1ORF23900P |
| 23905 | TIGR02687 family protein | |||
| 18305 | replication endonuclease from prophage-like | |||
| 18310 | M | M.StyTORF3409P (100% identity) | GATC | M.SenPK1ORF18310P |
| 18315 | 75 aa hypothetical protein | |||
| 19725 | DNA polymerase III subunit epsilon | |||
| 19730 | M | M.StyTORF4329P (100% identity) | M.SenPK1ORF19730P | |
| 19735 | endonuclease | |||
| 14285 | 190 aa hypothetical protein | |||
| 14290 | M | M.StyTORF1914P (100% identity) | M.SenPK1ORF14290P | |
| 14295 | 174 aa hypothetical protein | |||
| 14350 | DGQHR domain-containing protein | |||
| 14355 | M | M.StyTORF1926P (100% identity) | M.SenPK1ORF14355P | |
| 14360 | 79 aa hypothetical protein | |||
| 2680 | phosphohydrolase | |||
| 2685 | M | M.StyTDcmP (100% identity) | CCWGG | M.SenPK1DcmP |
| 2690 | V | V.StyTDcmP (100% identity) | V.SenPK1DcmP | |
| 2695 | drug/metabolite exporter YedA | |||
| 1675 | cell division protein DamX | |||
| 1680 | M | M.StyTDamP (100% identity) | GATC | M.SenPK1DamP |
| 1685 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9940 | MFS transporter | |||
| 9945 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenPK1ORF9945P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | SenPK1ORF9945P |
| 9960 | 33 aa hypothetical protein | |||
| 2590 | shufflon system plasmid conjugative transfer | |||
| 2595 | R | StyTORF872P (100% identity) | SenPK1ORF2600P | |
| 2600 | M | M.SmaBWH35ORF16840P (100% identity) | M.SenPK1ORF2600P | |
| 2605 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6325 | type I restriction-modification system | |||
| 6330 | R | StyTMrrP (100% identity) | SenPK1MrrP | |
| 6335 | 95 aa hypothetical protein | |||