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Putative Campylobacter concisus P2CDO4 RM systems
Ref: Liu,F. et al. Emerg Microbes Infect 7 (1) (2018) In press
REBASE ref # 26327
Complete sequence: 1,975,443 bp
GenBank #: CP021642
REBASE acronym: CcoDO4
Org_num: 28388
All begin CCS77_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1355 | metal-dependent hydrolase | |||
1356 | R | Cco19995ORF1750P (88% identity) | CcoDO4ORF1361P | |
1357 | Type I restriction-modification system, | |||
1358 | 291 aa hypothetical protein | |||
1359 | 173 aa hypothetical protein | |||
??? | S | S.CcoP3O1ORF2595P (64% identity) | S.CcoDO4ORF1361P | |
1361 | M | M.Cco19995ORF1750P (97% identity) | M.CcoDO4ORF1361P | |
1362 | Type I restriction-modification system | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
378 | Helicase loader DnaI | |||
379 | R | Csh3277ORF2321P (100% identity) | CcoDO4ORF380P | |
380 | M | M.Csh3277ORF2321P (100% identity) | M.CcoDO4ORF380P | |
381 | 218 aa hypothetical protein | |||
402 | Anthranilate synthase, amidotransferase | |||
403 | M | M.Cla2308ORFFP (71% identity) | M.CcoDO4ORF403P | |
404 | R | Csp13003ORF425P (80% identity) | CcoDO4ORF403P | |
405 | Phosphoribosylanthranilate isomerase | |||
637 | 306 aa hypothetical protein | |||
??? | S | Hci94105ORF1452P (10% identity) | S.CcoDO4ORF638P | |
638 | RM | restriction enzyme BcgI alpha chain-like | CcoDO4ORF638P | |
639 | Translation elongation factor LepA | |||
1954 | 88 aa hypothetical protein | |||
1955 | M | M.CcoP11S1ORF10025P (96% identity) | M.CcoDO4ORF1955P | |
1956 | S-ribosylhomocysteine lyase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
871 | Beta-hexosaminidase | |||
872 | R | CcoP11S1McrCP (59% identity) | CcoDO4McrCP | |
873 | R | CcoS1McrBP (77% identity) | CcoDO4McrBP | |
874 | 150 aa hypothetical protein |