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Putative Acidovorax avenae subsp. avenae MD5 RM systems
Ref: Zeng,Q. et al. Mol. Plant Microbe Interact. 30 (10), 813-828 (2017)
REBASE ref # 26303
Complete sequence: 5,593,946 bp
GenBank #: CP028295
REBASE acronym: AavMD5
Org_num: 28337
All begin C8246_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
15890 | LysR family transcriptional regulator | |||
15895 | M | M.Aav19860ORF4671P (97% identity) | M.AavMD5ORF15895P | |
15900 | 571 aa hypothetical protein | |||
15905 | R | AavAA811ORF6650P (96% identity) | AavMD5ORF15895P | |
15910 | single-stranded DNA-binding protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
5945 | 89 aa hypothetical protein | |||
??? | M | M.AciSC074ORF11820P (87% identity) | M.AavMD5ORF5955P | |
5960 | 96 aa hypothetical protein | |||
7045 | 202 aa hypothetical protein | |||
7050 | R | RthC33ORFFP (86% identity) | AavMD5ORF7055P | |
7055 | M | M.RthC33ORFFP (85% identity) | M.AavMD5ORF7055P | |
7060 | V | V.Bch19884ORFAP (53% identity) | V.AavMD5ORF7055P | |
7065 | IS5/IS1182 family transposase | |||
12175 | AbrB/MazE/SpoVT family DNA-binding | |||
12180 | RM | AciSC074ORF17875P (99% identity) | AavMD5ORF12180P | |
12185 | 405 aa hypothetical protein | |||
12275 | DUF3158 domain-containing protein | |||
12280 | M | M.Aci18784ORF18270P (96% identity) | M.AavMD5ORF12280P | |
12285 | single-stranded DNA-binding protein | |||
12285 | single-stranded DNA-binding protein | |||
??? | M | M.XsoPPL1ORF14120P (60% identity) | M.AavMD5ORF12295P | |
12300 | 109 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1045 | lactoylglutathione lyase | |||
1050 | M | M.Sma92II (72% identity) | M.AavMD5ORF1050P | |
1055 | 789 aa hypothetical protein | |||
18710 | IS630 family transposase | |||
18715 | R | AavSH7ORF18330P (100% identity) | AavMD5ORF18730P | |
18720 | 216 aa hypothetical protein | |||
18725 | 375 aa hypothetical protein | |||
18730 | M | M.AavSH7ORF18330P (100% identity) | M.AavMD5ORF18730P | |
18735 | ATP-dependent helicase | |||
21375 | AAA family ATPase | |||
21380 | R | AavSH7ORF16280P (100% identity) | AavMD5ORF21385P | |
??? | M | M.AavSH7ORF16280P (100% identity) | M.AavMD5ORF21385P | |
21400 | octaprenyl diphosphate synthase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
21365 | type IV-A pilus assembly ATPase PilB | |||
21370 | R | AavSH7McrCP (100% identity) | AavMD5McrCP | |
21375 | R | AavSH7McrBP (100% identity) | AavMD5McrBP | |
21380 | DEAD/DEAH box helicase |