Synechocystis species IPPAS B-1465 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Synechocystis species IPPAS B-1465 RM systems
Ref: Cerveny,J. et al. Life (Basel) 5 (1), 676-699 (2015)
REBASE ref # 26453
| Sequence length: | GenBank #: | |
| Chromosome: | 3,574,310 bp | CP028094 |
| plasmid pSYSG: | 44,343 bp | CP028098 |
| plasmid pSYSX: | 105,272 bp | CP028100 |
REBASE acronym: Ssp1465
Org_num: 28851
All begin C7I86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pSYSG | ||||
| 17430 | M48 family peptidase | |||
| ??? | R | SspC6803ORF18250P (100% identity) | Ssp1465ORF17245P | |
| 17205 | Appr-1-p processing protein | |||
| 17210 | DUF4433 domain-containing protein | |||
| 17215 | 59 aa hypothetical protein | |||
| 17220 | Zeta toxin family protein | |||
| 17225 | DNA polymerase subunit beta | |||
| 17230 | S | S.SspC6803ORF18250P (100% identity) | S.Ssp1465ORF17245P | |
| 17235 | 116 aa hypothetical protein | |||
| 17240 | DUF433 domain-containing protein | |||
| 17245 | M | M.SspC6803ORF18250P (100% identity) | M.Ssp1465ORF17245P | |
| 17250 | 124 aa hypothetical protein | |||
| plasmid pSYSX | ||||
| 18575 | HNH endonuclease | |||
| 18580 | M | M.SspC6803ORF17640P (100% identity) | M.Ssp1465ORF18580P | |
| 18585 | S | S.SspC6803ORF17640P (100% identity) | S.Ssp1465ORF18580P | |
| 18590 | Fic family protein | |||
| 18595 | 78 aa hypothetical protein | |||
| 18600 | type II toxin-antitoxin system HigB family | |||
| 18605 | transcriptional regulator | |||
| 18610 | R | SspC6803ORF17640P (100% identity) | Ssp1465ORF18580P | |
| 18615 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11740 | GMP synthase (glutamine-hydrolyzing) | |||
| 11745 | M | M.SspPCCPORF2244P (100% identity) | CGATCG | M.Ssp1465ORF11745P |
| 11750 | undecaprenyl-diphosphatase | |||
| 15965 | 84 aa hypothetical protein | |||
| 15970 | M | M.SspPCCPORF3045P (100% identity) | GGCC | M.Ssp1465ORF15970P |
| 15975 | acetyl-CoA carboxylase carboxyl transferase | |||
| plasmid pSYSX | ||||
| 18350 | PIN domain-containing protein | |||
| 18355 | RM | SspC6803ORF17435P (100% identity) | GAAGGC | Ssp1465ORF18355P |
| 18360 | DUF2513 domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5970 | 301 aa hypothetical protein | |||
| 5975 | M | M.SspPCCPORF1151P (100% identity) | GATC | M.Ssp1465ORF5975P |
| 5980 | IS5/IS1182 family transposase | |||