Salmonella enterica subsp. enterica serovar Heidelberg SE143 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Heidelberg SE143 RM systems
Ref: Kaldhone,P.R. et al. unpublished
REBASE ref # 25693
Contig set: 5,346,753 bp
GenBank #: NPEL00000000 (NZ_NPEL00000000)
REBASE acronym: SenSE143
Org_num: 27528
All begin CH229_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22235 | 110 aa hypothetical protein | |||
| 22240 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenSE143ORF22245P |
| 22245 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenSE143ORF22245P |
| 22250 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenSE143ORF22245P |
| 22255 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23145 | phosphohydrolase | |||
| 23150 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenSE143DcmP |
| 23155 | V | V.StyTDcmP (100% identity) | V.SenSE143DcmP | |
| 23160 | drug/metabolite exporter YedA | |||
| 11325 | DNA-binding protein | |||
| 11330 | M | M.YpsF1ORFDP (100% identity) | M.SenSE143ORF11330P | |
| 11335 | 284 aa hypothetical protein | |||
| 6450 | RM | Sens12373ORF19575P (100% identity) | GATCAG | SenSE143ORF6450P |
| 6455 | ATP-dependent helicase | |||
| 19035 | nuclease | |||
| 19040 | M | M.YpsF1ORFCP (100% identity) | M.SenSE143ORF19040P | |
| 19045 | 55 aa hypothetical protein | |||
| 26800 | replication endonuclease | |||
| 26805 | M | M.SensSZL38ORF19965P (100% identity) | M.SenSE143ORF26805P | |
| 26810 | DUF2732 domain-containing protein | |||
| 14580 | glutamine--tRNA ligase | |||
| 14585 | M | M.SenYU39ORF5083P (100% identity) | M.SenSE143ORF14585P | |
| 14590 | 226 aa hypothetical protein | |||
| 4635 | 158 aa hypothetical protein | |||
| 4640 | M | M.YrupYR1ORFCP (100% identity) | M.SenSE143ORF4640P | |
| 4645 | 100 aa hypothetical protein | |||
| 12850 | Fis family transcriptional regulator | |||
| 12855 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSE143ORF12855P |
| 12860 | DUF2556 domain-containing protein | |||
| 18115 | exonuclease | |||
| 18120 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenSE143ORF18120P |
| 18125 | DUF4060 domain-containing protein | |||
| 12170 | 73 aa hypothetical protein | |||
| 12175 | M | M.SspPIBORF23080P (100% identity) | M.SenSE143ORF12175P | |
| 12180 | 101 aa hypothetical protein | |||
| 4390 | cell division protein DamX | |||
| 4395 | M | M.StyTDamP (100% identity) | GATC | M.SenSE143DamP |
| 4400 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10620 | 33 aa hypothetical protein | |||
| 10625 | R | Sens12373ORF17180P (100% identity) | CAGAG | SenSE143ORF10630P |
| 10630 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenSE143ORF10630P |
| 10635 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22250 | type I restriction-modification system | |||
| 22255 | R | StyUK1MrrP (100% identity) | SenSE143MrrP | |
| 22260 | 95 aa hypothetical protein | |||