Salmonella enterica subsp. enterica serovar Heidelberg SE142 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg SE142 RM systems
Ref: Kaldhone,P.R. et al. unpublished
REBASE ref # 25693
Contig set: 5,227,517 bp
GenBank #: NPFC00000000 (NZ_NPFC00000000)
REBASE acronym: SenSE142
Org_num: 27527
All begin CH226_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19470 | 110 aa hypothetical protein | |||
| 19475 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenSE142ORF19480P |
| 19480 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenSE142ORF19480P |
| 19485 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenSE142ORF19480P |
| 19490 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25905 | DNA-binding protein | |||
| 25910 | M | M.YpsF1ORFDP (100% identity) | M.SenSE142ORF25910P | |
| 25915 | 284 aa hypothetical protein | |||
| 4890 | ribulose-phosphate 3-epimerase | |||
| 4895 | M | M.StyTDamP (100% identity) | GATC | M.SenSE142DamP |
| 4900 | cell division protein DamX | |||
| 25980 | RM | Sens12373ORF19575P (100% identity) | GATCAG | SenSE142ORF25980P |
| 25985 | ATP-dependent helicase | |||
| 25130 | DUF2556 domain-containing protein | |||
| 25135 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSE142ORF25135P |
| 25140 | Fis family transcriptional regulator | |||
| 21795 | phosphohydrolase | |||
| 21800 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenSE142DcmP |
| 21805 | V | V.StyTDcmP (100% identity) | V.SenSE142DcmP | |
| 21810 | drug/metabolite exporter YedA | |||
| 1935 | 73 aa hypothetical protein | |||
| 1940 | M | M.SspPIBORF23080P (100% identity) | M.SenSE142ORF1940P | |
| 1945 | 101 aa hypothetical protein | |||
| 7375 | nuclease | |||
| 7380 | M | M.YpsF1ORFCP (100% identity) | M.SenSE142ORF7380P | |
| 7385 | 55 aa hypothetical protein | |||
| 325 | DUF4060 domain-containing protein | |||
| 330 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenSE142ORF330P |
| 335 | exonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8070 | MFS transporter | |||
| 8075 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenSE142ORF8075P |
| 8080 | R | Sens12373ORF17180P (100% identity) | CAGAG | SenSE142ORF8075P |
| 8085 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19485 | type I restriction-modification system | |||
| 19490 | R | StyUK1MrrP (100% identity) | SenSE142MrrP | |
| 19495 | 95 aa hypothetical protein | |||