Salmonella enterica subsp. enterica serovar Typhimurium D15-052810 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium D15-052810 RM systems
Ref: Shetty,D.M. et al. unpublished
REBASE ref # 25691
Contig set: 5,007,586 bp
GenBank #: NOXI00000000 (NZ_NOXI00000000)
REBASE acronym: Sen52810
Org_num: 27520
All begin CH309_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10110 | restriction endonuclease | |||
| 10115 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen52810ORF10120P |
| 10120 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen52810ORF10120P |
| 10125 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen52810ORF10120P |
| 10130 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19035 | drug/metabolite exporter YedA | |||
| 19040 | V | V.StyUK1DcmP (100% identity) | V.Sen52810DcmP | |
| 19045 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen52810DcmP |
| 19050 | phosphohydrolase | |||
| 21395 | Fis family transcriptional regulator | |||
| 21400 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen52810ORF21400P |
| 21405 | DUF2556 domain-containing protein | |||
| 15865 | PerC family transcriptional regulator | |||
| 15870 | M | M.StyUK1V (100% identity) | GATC | M.Sen52810ORF15870P |
| 15875 | RusA family crossover junction | |||
| 13795 | 89 aa hypothetical protein | |||
| 13800 | M | M.StyUK1ORFAP (100% identity) | M.Sen52810ORF13800P | |
| 13805 | 73 aa hypothetical protein | |||
| 5480 | SPOR domain-containing protein | |||
| 5485 | M | M.StyTDamP (100% identity) | GATC | M.Sen52810DamP |
| 5490 | ribulose-phosphate 3-epimerase | |||
| 3750 | 363 aa hypothetical protein | |||
| 3755 | RM | StyUK1IV (100% identity) | GATCAG | Sen52810ORF3755P |
| 3760 | DNA repair protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16530 | MFS transporter | |||
| 16535 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen52810ORF16535P |
| 16540 | R | StyUK1IP (99% identity) | CAGAG | Sen52810ORF16535P |
| 16545 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10105 | 95 aa hypothetical protein | |||
| 10110 | R | StyUK1MrrP (100% identity) | Sen52810MrrP | |
| 10115 | type I restriction-modification system | |||