Pseudomonas species SWI6 |
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Putative Pseudomonas species SWI6 RM systems
Ref: Wildschutte,H. and Basalla,J. unpublished
REBASE ref # 26173
Complete sequence: 5,652,054 bp
GenBank #: CP026676
REBASE acronym: PspSWI6
Org_num: 27587
All begin C4Q28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23555 | integrase | |||
| 23560 | R | PfuZJU1IIP (95% identity) | PspSWI6ORF23575P | |
| 23565 | 61 aa hypothetical protein | |||
| 23570 | S | S.RarCa6ORF10420P (52% identity) | S.PspSWI6ORF23575P | |
| 23575 | M | M.PotTL17ORF24535P (93% identity) | M.PspSWI6ORF23575P | |
| 23580 | 80 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3050 | Lrp/AsnC family transcriptional regulator | |||
| 3055 | M | M.PspB120ORF22440P (98% identity) | M.PspSWI6ORF3055P | |
| 3060 | 365 aa hypothetical protein | |||
| 11015 | 157 aa hypothetical protein | |||
| 11020 | M | M.Ppu1456ORF1963P (95% identity) | M.PspSWI6ORF11020P | |
| 11025 | 178 aa hypothetical protein | |||
| 11055 | 94 aa hypothetical protein | |||
| 11060 | M | M.PspSWI44ORF2040P (96% identity) | M.PspSWI6ORF11060P | |
| 11065 | 177 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6060 | DUF4391 domain-containing protein | |||
| 6065 | M | M.PluMyb11ORF20535P (84% identity) | M.PspSWI6ORF6065P | |
| 6070 | R | PspRW409ORF28180P (95% identity) | PspSWI6ORF6065P | |
| 6075 | SIR2 family protein | |||