Salmonella enterica subsp. enterica RM11060 |
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Putative Salmonella enterica subsp. enterica RM11060 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 25281
| Sequence length: | GenBank #: | |
| Chromosome: | 4,892,239 bp | CP022658 |
| plasmid pRM11060-1: | 70,062 bp | CP022659 |
| plasmid pRM11060-2: | 290,957 bp | CP022660 |
REBASE acronym: Sen11060
Org_num: 26357
All begin CGA23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRM11060-2 | ||||
| 26840 | DNA invertase | |||
| 26845 | M | M.SenLG26II (100% identity) | M.Sen11060ORF26845P | |
| 26850 | S | S.SenLG26II (100% identity) | S.Sen11060ORF26845P | |
| 26855 | R | SenLG26IIP (99% identity) | Sen11060ORF26845P | |
| 26860 | ISL3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9875 | 140 aa hypothetical protein | |||
| 9880 | M | M.SenLG26ORF11390P (100% identity) | M.Sen11060ORF9880P | |
| 9885 | 102 aa hypothetical protein | |||
| 10965 | drug/metabolite exporter YedA | |||
| 10970 | V | very short patch repair endonuclease | V.Sen11060DcmP | |
| 10975 | M | M.SspZ69DcmP (99% identity) | CCWGG | M.Sen11060DcmP |
| 10980 | phosphohydrolase | |||
| 18635 | Fis family transcriptional regulator | |||
| 18640 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen11060ORF18640P |
| 18645 | DUF2556 domain-containing protein | |||
| 19135 | ribulose-phosphate 3-epimerase | |||
| 19140 | M | DNA adenine methylase | GATC | M.Sen11060DamP |
| 19145 | cell division protein DamX | |||
| 21990 | 70 aa hypothetical protein | |||
| 21995 | M | M.SenS1655ORF23670P (100% identity) | M.Sen11060ORF21995P | |
| 22000 | 65 aa hypothetical protein | |||
| 22000 | 65 aa hypothetical protein | |||
| 22005 | M | M1.SenS1655ORF23660P (100% identity) | M.Sen11060ORF22005P | |
| 22010 | replication endonuclease | |||
| 24370 | integrase | |||
| 24375 | M | M.Ssp6947ORF4185P (100% identity) | M.Sen11060ORF24375P | |
| ??? | R | SenSMu02ORF1910P (100% identity) | Sen11060ORF24375P | |
| 24385 | 96 aa hypothetical protein | |||
| 24445 | XRE family transcriptional regulator | |||
| 24450 | R | Ssp6947ORF4170P (100% identity) | Sen11060ORF24450P | |
| 24455 | YebC/PmpR family DNA-binding transcriptional | |||
| plasmid pRM11060-1 | ||||
| 25000 | replication endonuclease | |||
| 25005 | M | M1.SenS1655ORF23660P (100% identity) | M.Sen11060ORF25005P | |
| 25010 | 65 aa hypothetical protein | |||
| 25010 | 65 aa hypothetical protein | |||
| 25015 | M | M.SenS1655ORF23670P (100% identity) | M.Sen11060ORF25015P | |
| 25020 | 70 aa hypothetical protein | |||
| plasmid pRM11060-2 | ||||
| 26400 | 63 aa hypothetical protein | |||
| 26405 | M | M.SenLG26ORF1225P (100% identity) | M.Sen11060ORF26405P | |
| 26410 | DUF1380 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1925 | MFS transporter | |||
| 1930 | M | M.SspZ69ORF17325P (100% identity) | CAGAG | M.Sen11060ORF1930P |
| 1935 | R | Sens29871ORF18450P (100% identity) | CAGAG | Sen11060ORF1930P |
| 1940 | 33 aa hypothetical protein | |||