Escherichia coli ARS-CC9640 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli ARS-CC9640 RM systems
Ref: Kim,S.W. et al. unpublished
REBASE ref # 24956
Contig set: 5,265,577 bp
GenBank #: NBVX00000000 (NZ_NBVX00000000)
REBASE acronym: Eco9640
Org_num: 25906
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6 | 65 aa hypothetical protein | |||
| 7 | S | S.EcoWH398ORF26840P (100% identity) | S.Eco9640ORFLP | |
| 9 | M | M.Ecos641ORF18845P (100% identity) | M.Eco9640ORFLP | |
| 10 | 78 aa hypothetical protein | |||
| 8 | 210 aa hypothetical protein | |||
| 11 | M | M.EcoCF341ORF25130P (98% identity) | M.Eco9640ORFEP | |
| 14 | S | S.SflN101ORF19075P (100% identity) | S.Eco9640ORFEP | |
| 15 | Uncharacterized protein | |||
| 231 | Mrr restriction system protein | |||
| 232 | M | M.Ecos641ORF3050P (100% identity) | M.Eco9640ORFFP | |
| 234 | S | S.Ecos641ORF3050P (100% identity) | S.Eco9640ORFFP | |
| 235 | 65 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Eco477TORFAP (100% identity) | GATC | M.Eco9640ORFDP |
| 5 | NinB protein | |||
| 16 | Uncharacterized protein | |||
| 18 | M | M.Eco4587ORFHP (94% identity) | M.Eco9640ORFCP | |
| 22 | 66 aa hypothetical protein | |||
| 34 | Uncharacterized protein | |||
| 36 | M | M.SflN92ORF24820P (100% identity) | M.Eco9640ORFBP | |
| 39 | Uncharacterized protein | |||
| 41 | 59 aa hypothetical protein | |||
| 42 | RM | Efe41C23ORF15565P (100% identity) | CTGAAG | Eco9640ORFJP |
| 43 | Modification methylase Eco57IB | |||
| 42 | Type IIS restriction enzyme Eco57I | |||
| 43 | M | M.Efe41C23ORF15565P (100% identity) | CTGAAG | M.Eco9640ORFKP |
| 44 | Uncharacterized protein | |||
| 22 | periplasmic protein | |||
| 23 | M | M.EcoWH398ORF17455P (100% identity) | ATGCAT | M.Eco9640ORFAP |
| 25 | 98 aa hypothetical protein | |||
| 101 | Uncharacterized protein | |||
| 106 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco9640ORFGP |
| 108 | LexA DNA binding domain protein | |||
| 121 | 82 aa hypothetical protein | |||
| 122 | M | M.Sso63633ORF22290P (100% identity) | M.Eco9640ORFHP | |
| 345 | Uncharacterized inner membrane transporter YedA | |||
| 346 | V | V.EcoW56DcmP (100% identity) | V.Eco9640DcmP | |
| 349 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco9640DcmP |
| 351 | HD domain protein | |||
| 409 | Cell division protein DamX | |||
| 413 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9640DamP |
| 415 | Ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 37 | 61 aa hypothetical protein | |||
| 38 | R | Efe41C23McrBP (100% identity) | Eco9640McrBP | |
| 39 | R | Efe41C23McrCP (100% identity) | Eco9640McrCP | |
| 40 | Type I restriction-modification system, DNA-methyltransferase subunit M | |||