Escherichia coli PA45B |
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Putative Escherichia coli PA45B RM systems
Ref: Goh,K.G.K. et al. unpublished
REBASE ref # 25063
| Sequence length: | GenBank #: | |
| Chromosome: | 5,074,754 bp | CP021288 |
| plasmid pPA45B: | 147,172 bp | CP021289 |
REBASE acronym: EcoPA45B
Org_num: 25722
All begin PA45B_, PA45B_A
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 782 | 75 aa hypothetical protein | |||
| 781 | M | M.EcoR18ORF465P (100% identity) | GATC | M.EcoPA45BORF781P |
| 780 | 804 aa hypothetical protein | |||
| 273 | 65 aa hypothetical protein | |||
| 272 | M | M.SboBSORF1444P (100% identity) | A | M.EcoPA45BORF272P |
| 268 | 75 aa hypothetical protein | |||
| 4500 | membrane transport protein | |||
| 4499 | V | V.EcosC25DcmP (100% identity) | V.EcoPA45BDcmP | |
| 4498 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoPA45BDcmP |
| 4497 | phosphohydrolase | |||
| 3644 | LexA DNA-binding transcriptional repressor | |||
| 3643 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoPA45BORF3643P |
| 3642 | yfdN_2 | |||
| 2928 | Fis DNA-binding transcriptional dual regulator | |||
| 2927 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoPA45BORF2927P |
| 2926 | membrane protein | |||
| 2807 | ribulose-5-phosphate 3-epimerase | |||
| 2806 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPA45BDamP |
| 2805 | cell division protein DamX | |||
| 1738 | 989 aa hypothetical protein | |||
| 1737 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoPA45BORF1737P |
| 1736 | 341 aa hypothetical protein | |||
| 1688 | IS3 element protein InsF | |||
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoPA45BORF1687P |
| 1686 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoPA45BORF1687P |
| 1685 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoPA45BORF1687P |
| 1684 | 428 aa hypothetical protein | |||
| plasmid pPA45B | ||||
| 133 | 73 aa hypothetical protein | |||
| 134 | M | M.Sfl2142ORF380P (100% identity) | M.EcoPA45BORF134P | |
| 135 | 118 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3684 | 257 aa hypothetical protein | |||
| 3683 | R | EspFAAGmrSDP (100% identity) | EcoPA45BGmrSDP | |
| 3682 | site-specific DNA recombinase | |||
| 1685 | 579 aa hypothetical protein | |||
| 1684 | R | EcosS9McrCP (100% identity) | EcoPA45BMcrCP | |
| 1683 | R | EcosS3McrBP (100% identity) | EcoPA45BMcrBP | |
| 1682 | glycosyl transferase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 437 | 146 aa hypothetical protein | |||
| 436 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoPA45BORF436P |
| 435 | 113 aa hypothetical protein | |||