Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM1869A |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM1869A RM systems
Ref: Arabyan,N. et al. unpublished
REBASE ref # 24770
Contig set: 4,894,500 bp
GenBank #: MZYL00000000 (NZ_MZYL00000000)
REBASE acronym: Sen8417
Org_num: 25214
All begin B4581_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16865 | restriction endonuclease | |||
| 16870 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen8417ORF16875P |
| 16875 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen8417ORF16875P |
| 16880 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen8417ORF16875P |
| 16885 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14475 | ribulose-phosphate 3-epimerase | |||
| 14480 | M | M.StyTDamP (100% identity) | GATC | M.Sen8417DamP |
| 14485 | SPOR domain-containing protein | |||
| 8330 | 73 aa hypothetical protein | |||
| 8335 | M | M.StyUK1ORFAP (100% identity) | M.Sen8417ORF8335P | |
| 8340 | 0 aa hypothetical protein | |||
| 19215 | Fis family transcriptional regulator | |||
| 19220 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8417ORF19220P |
| 19225 | DUF2556 domain-containing protein | |||
| 17045 | DNA repair protein | |||
| 17050 | RM | StyUK1IV (100% identity) | GATCAG | Sen8417ORF17050P |
| 17055 | 363 aa hypothetical protein | |||
| 5150 | phosphohydrolase | |||
| 5155 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen8417DcmP |
| 5160 | V | V.StyUK1DcmP (100% identity) | V.Sen8417DcmP | |
| 5165 | amino acid exporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12370 | MFS transporter | |||
| 12375 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen8417ORF12375P |
| 12380 | R | StyUK1IP (99% identity) | CAGAG | Sen8417ORF12375P |
| 12385 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16860 | 95 aa hypothetical protein | |||
| 16865 | R | StyUK1MrrP (100% identity) | Sen8417Mrr2P | |
| 16870 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20335 | replication endonuclease from prophage-like | |||
| 20340 | M | M.StyLTORF13745P (100% identity) | M.Sen8417ORF20340P | |
| 20345 | 75 aa hypothetical protein | |||