Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO_STM0907 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO_STM0907 RM systems
Ref: Arabyan,N. et al. unpublished
REBASE ref # 24770
Contig set: 4,894,342 bp
GenBank #: MXBB00000000 (NZ_MXBB00000000)
REBASE acronym: Sen8409
Org_num: 25213
All begin B4597_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13570 | 110 aa hypothetical protein | |||
| 13575 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen8409ORF13580P |
| 13580 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen8409ORF13580P |
| 13585 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen8409ORF13580P |
| 13590 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1460 | ribulose-phosphate 3-epimerase | |||
| 1465 | M | M.StyTDamP (100% identity) | GATC | M.Sen8409DamP |
| 1470 | SPOR domain-containing protein | |||
| 16290 | DUF2556 domain-containing protein | |||
| 16295 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8409ORF16295P |
| 16300 | Fis family transcriptional regulator | |||
| 18275 | amino acid exporter | |||
| 18280 | V | V.StyUK1DcmP (100% identity) | V.Sen8409DcmP | |
| 18285 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen8409DcmP |
| 18290 | phosphohydrolase | |||
| 20210 | 0 aa hypothetical protein | |||
| 20215 | M | M.StyUK1ORFAP (100% identity) | M.Sen8409ORF20215P | |
| 20220 | 73 aa hypothetical protein | |||
| 13400 | 363 aa hypothetical protein | |||
| 13405 | RM | StyUK1IV (100% identity) | GATCAG | Sen8409ORF13405P |
| 13410 | DNA repair protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11100 | 33 aa hypothetical protein | |||
| 11105 | R | StyUK1IP (99% identity) | CAGAG | Sen8409ORF11110P |
| 11110 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen8409ORF11110P |
| 11115 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13585 | type I restriction-modification system | |||
| 13590 | R | StyUK1MrrP (100% identity) | Sen8409MrrP | |
| 13595 | 95 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8060 | replication endonuclease from prophage-like | |||
| 8065 | M | M.StyLTORF13745P (100% identity) | M.Sen8409ORF8065P | |
| 8070 | 75 aa hypothetical protein | |||