Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO_STM0018 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO_STM0018 RM systems
Ref: Arabyan,N. et al. unpublished
REBASE ref # 24770
Contig set: 4,892,462 bp
GenBank #: MZNQ00000000 (NZ_MZNQ00000000)
REBASE acronym: SenLT2W
Org_num: 25211
All begin B4582_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7285 | 110 aa hypothetical protein | |||
| 7290 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenLT2WORF7295P |
| 7295 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenLT2WORF7295P |
| 7300 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | SenLT2WORF7295P |
| 7305 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | DUF2556 domain-containing protein | |||
| 50 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLT2WORF50P |
| 55 | Fis family transcriptional regulator | |||
| 18215 | amino acid exporter | |||
| 18220 | V | V.StyUK1DcmP (100% identity) | V.SenLT2WDcmP | |
| 18225 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenLT2WDcmP |
| 18230 | phosphohydrolase | |||
| 16190 | 0 aa hypothetical protein | |||
| 16195 | M | M.StyUK1ORFAP (100% identity) | M.SenLT2WORF16195P | |
| 16200 | 73 aa hypothetical protein | |||
| 7115 | 363 aa hypothetical protein | |||
| 7120 | RM | StyUK1IV (100% identity) | GATCAG | SenLT2WORF7120P |
| 7125 | DNA repair protein | |||
| 11415 | SPOR domain-containing protein | |||
| 11420 | M | M.StyTDamP (100% identity) | GATC | M.SenLT2WDamP |
| 11425 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11600 | MFS transporter | |||
| 11605 | M | M.StyUK1I (100% identity) | CAGAG | M.SenLT2WORF11605P |
| 11610 | R | StyUK1IP (99% identity) | CAGAG | SenLT2WORF11605P |
| 11615 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7300 | type I restriction-modification system | |||
| 7305 | R | StyUK1MrrP (100% identity) | SenLT2WMrrP | |
| 7310 | 95 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16490 | 75 aa hypothetical protein | |||
| 16495 | M | M.StyLTORF13745P (100% identity) | M.SenLT2WORF16495P | |
| 16500 | replication endonuclease from prophage-like | |||