Salmonella enterica subsp. enterica serovar Typhimurium LT22 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium LT22 RM systems
Ref: Kazmierczak,R.A. et al. unpublished
REBASE ref # 24742
Contig set: 4,989,304 bp
GenBank #: NDGU00000000 (NZ_NDGU00000000)
REBASE acronym: SenLT22
Org_num: 25075
All begin B9G74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6695 | restriction endonuclease | |||
| 6700 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | SenLT22ORF6705P |
| 6705 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenLT22ORF6705P |
| 6710 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenLT22ORF6705P |
| 6715 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23710 | DUF2556 domain-containing protein | |||
| 23715 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.SenLT22ORF23715P |
| 23720 | Fis family transcriptional regulator | |||
| 9495 | amino acid exporter | |||
| 9500 | V | V.StyUK1DcmP (100% identity) | V.SenLT22DcmP | |
| 9505 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenLT22DcmP |
| 9510 | phosphohydrolase | |||
| 19925 | 0 aa hypothetical protein | |||
| 19930 | M | M.StyUK1ORFAP (100% identity) | M.SenLT22ORF19930P | |
| 19935 | 73 aa hypothetical protein | |||
| 22420 | 308 aa hypothetical protein | |||
| 22425 | M | M.StyR64ORFAP (100% identity) | M.SenLT22ORF22425P | |
| 22430 | 73 aa hypothetical protein | |||
| 6875 | DNA repair protein | |||
| 6880 | RM | StyUK1IV (100% identity) | GATCAG | SenLT22ORF6880P |
| 6885 | 363 aa hypothetical protein | |||
| 6015 | SPOR domain-containing protein | |||
| 6020 | M | M.StyTDamP (100% identity) | GATC | M.SenLT22DamP |
| 6025 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 165 | MFS transporter | |||
| 170 | M | M.StyUK1I (100% identity) | CAGAG | M.SenLT22ORF170P |
| 175 | R | StyUK1IP (99% identity) | CAGAG | SenLT22ORF170P |
| 180 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6690 | 95 aa hypothetical protein | |||
| 6695 | R | StyUK1MrrP (100% identity) | SenLT22MrrP | |
| 6700 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19350 | endonuclease | |||
| 19355 | M | M.StyLTORF13745P (100% identity) | M.SenLT22ORF19355P | |
| 19360 | 75 aa hypothetical protein | |||