Salmonella enterica subsp. enterica serovar Typhimurium LT21 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium LT21 RM systems
Ref: Kazmierczak,R.A. et al. unpublished
REBASE ref # 24742
Contig set: 4,974,307 bp
GenBank #: NDGT00000000 (NZ_NDGT00000000)
REBASE acronym: SenLT21
Org_num: 25074
All begin B7480_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7645 | restriction endonuclease | |||
| 7650 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | SenLT21ORF7655P |
| 7655 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenLT21ORF7655P |
| 7660 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenLT21ORF7655P |
| 7665 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25475 | 73 aa hypothetical protein | |||
| 25480 | M | M.Sso866ORF27155P (100% identity) | M.SenLT21ORF25480P | |
| 25485 | 308 aa hypothetical protein | |||
| 5250 | ribulose-phosphate 3-epimerase | |||
| 5255 | M | M.StyTDamP (100% identity) | GATC | M.SenLT21DamP |
| 5260 | SPOR domain-containing protein | |||
| 23890 | DUF2556 domain-containing protein | |||
| 23895 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLT21ORF23895P |
| 23900 | Fis family transcriptional regulator | |||
| 8945 | amino acid exporter | |||
| 8950 | V | V.StyUK1DcmP (100% identity) | V.SenLT21DcmP | |
| 8955 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenLT21DcmP |
| 8960 | phosphohydrolase | |||
| 19840 | 73 aa hypothetical protein | |||
| 19845 | M | M.StyUK1ORFAP (100% identity) | M.SenLT21ORF19845P | |
| 19850 | 0 aa hypothetical protein | |||
| 7825 | DNA repair protein | |||
| 7830 | RM | StyUK1IV (99% identity) | GATCAG | SenLT21ORF7830P |
| 7835 | 363 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5050 | 33 aa hypothetical protein | |||
| 5055 | R | StyUK1IP (99% identity) | CAGAG | SenLT21ORF5060P |
| 5060 | M | M.StyUK1I (100% identity) | CAGAG | M.SenLT21ORF5060P |
| 5065 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7640 | 95 aa hypothetical protein | |||
| 7645 | R | StyUK1MrrP (100% identity) | SenLT21MrrP | |
| 7650 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19370 | replication endonuclease from prophage-like | |||
| 19375 | M | M.StyLTORF13745P (100% identity) | M.SenLT21ORF19375P | |
| 19380 | 75 aa hypothetical protein | |||