Salmonella enterica subsp. enterica serovar Typhimurium LT20 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium LT20 RM systems
Ref: Kazmierczak,R.A. et al. unpublished
REBASE ref # 24742
Contig set: 5,030,446 bp
GenBank #: NDGS00000000 (NZ_NDGS00000000)
REBASE acronym: SenLT20
Org_num: 25073
All begin B9G75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7815 | 110 aa hypothetical protein | |||
| 7820 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenLT20ORF7825P |
| 7825 | M | M.StyLTIII (99% identity) | GAGNNNNNNRTAYG | M.SenLT20ORF7825P |
| 7830 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | SenLT20ORF7825P |
| 7835 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5170 | ribulose-phosphate 3-epimerase | |||
| 5175 | M | M.StyTDamP (100% identity) | GATC | M.SenLT20DamP |
| 5180 | SPOR domain-containing protein | |||
| 23405 | DUF2556 domain-containing protein | |||
| 23410 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLT20ORF23410P |
| 23415 | Fis family transcriptional regulator | |||
| 10370 | amino acid exporter | |||
| 10375 | V | V.StyUK1DcmP (100% identity) | V.SenLT20DcmP | |
| 10380 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenLT20DcmP |
| 10385 | phosphohydrolase | |||
| 23010 | 308 aa hypothetical protein | |||
| 23015 | M | M.StyR64ORFAP (100% identity) | M.SenLT20ORF23015P | |
| 23020 | 73 aa hypothetical protein | |||
| 19820 | 0 aa hypothetical protein | |||
| 19825 | M | M.StyUK1ORFAP (99% identity) | M.SenLT20ORF19825P | |
| 19830 | 73 aa hypothetical protein | |||
| 7645 | 363 aa hypothetical protein | |||
| 7650 | RM | StyUK1IV (100% identity) | GATCAG | SenLT20ORF7650P |
| 7655 | DNA repair protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3055 | MFS transporter | |||
| 3060 | M | M.StyUK1I (100% identity) | CAGAG | M.SenLT20ORF3060P |
| 3065 | R | StyUK1IP (99% identity) | CAGAG | SenLT20ORF3060P |
| 3070 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7830 | type I restriction-modification system | |||
| 7835 | R | StyUK1MrrP (100% identity) | SenLT20Mrr2P | |
| 7840 | 95 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19340 | replication endonuclease from prophage-like | |||
| 19345 | M | M.StyLTORF13745P (100% identity) | M.SenLT20ORF19345P | |
| 19350 | 75 aa hypothetical protein | |||