Salmonella enterica subsp. enterica serovar Typhimurium LT18 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium LT18 RM systems
Ref: Kazmierczak,R.A. et al. unpublished
REBASE ref # 24742
Contig set: 4,919,308 bp
GenBank #: NDGQ00000000 (NZ_NDGQ00000000)
REBASE acronym: SenLT18
Org_num: 25071
All begin B9G76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7785 | 110 aa hypothetical protein | |||
| 7790 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenLT18ORF7795P |
| 7795 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenLT18ORF7795P |
| 7800 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenLT18ORF7795P |
| 7805 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5390 | ribulose-phosphate 3-epimerase | |||
| 5395 | M | M.StyTDamP (100% identity) | GATC | M.SenLT18DamP |
| 5400 | SPOR domain-containing protein | |||
| 23480 | DUF2556 domain-containing protein | |||
| 23485 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLT18ORF23485P |
| 23490 | Fis family transcriptional regulator | |||
| 11440 | amino acid exporter | |||
| 11445 | V | V.StyUK1DcmP (100% identity) | V.SenLT18DcmP | |
| 11450 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenLT18DcmP |
| 11455 | phosphohydrolase | |||
| 21160 | 308 aa hypothetical protein | |||
| 21165 | M | M.SspPIBORF23080P (100% identity) | M.SenLT18ORF21165P | |
| 21170 | 73 aa hypothetical protein | |||
| 7615 | 363 aa hypothetical protein | |||
| 7620 | RM | StyUK1IV (100% identity) | GATCAG | SenLT18ORF7620P |
| 7625 | DNA repair protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19895 | 208 aa hypothetical protein | |||
| 19900 | R | SenXSKORFDP (100% identity) | SenLT18ORF19905P | |
| 19905 | M | M.SenXSKORFDP (100% identity) | M.SenLT18ORF19905P | |
| 19910 | 291 aa hypothetical protein | |||
| 15265 | 33 aa hypothetical protein | |||
| 15270 | R | StyUK1IP (99% identity) | CAGAG | SenLT18ORF15275P |
| 15275 | M | M.StyUK1I (100% identity) | CAGAG | M.SenLT18ORF15275P |
| 15280 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7800 | type I restriction-modification system | |||
| 7805 | R | StyUK1MrrP (100% identity) | SenLT18Mrr2P | |
| 7810 | 95 aa hypothetical protein | |||