Salmonella enterica subsp. enterica serovar Typhimurium LT1 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium LT1 RM systems
Ref: Kazmierczak,R.A. et al. unpublished
REBASE ref # 24742
Contig set: 4,723,877 bp
GenBank #: NDGP00000000 (NZ_NDGP00000000)
REBASE acronym: SenLT1
Org_num: 25070
All begin B9G78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5310 | restriction endonuclease | |||
| 5315 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenLT1ORF5320P |
| 5320 | M | M.SenQ1ORF11385P (100% identity) | GAGNNNNNNRTAYG | M.SenLT1ORF5320P |
| 5325 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenLT1ORF5320P |
| 5330 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9295 | 129 aa hypothetical protein | |||
| 9300 | M | M.StyUK1V (100% identity) | GATC | M.SenLT1ORF9300P |
| 9305 | 160 aa hypothetical protein | |||
| 22330 | DUF2556 domain-containing protein | |||
| 22335 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenLT1ORF22335P |
| 22340 | Fis family transcriptional regulator | |||
| 20955 | amino acid exporter | |||
| 20960 | V | V.StyUK1DcmP (100% identity) | V.SenLT1DcmP | |
| 20965 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenLT1DcmP |
| 20970 | phosphohydrolase | |||
| 5490 | DNA repair protein | |||
| 5495 | RM | StyUK1IV (100% identity) | GATCAG | SenLT1ORF5495P |
| 5500 | 363 aa hypothetical protein | |||
| 12475 | cell division protein DamX | |||
| 12480 | M | M.StyTDamP (100% identity) | GATC | M.SenLT1DamP |
| 12485 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4475 | 33 aa hypothetical protein | |||
| 4480 | R | StyUK1IP (99% identity) | CAGAG | SenLT1ORF4485P |
| 4485 | M | M.StyUK1I (100% identity) | CAGAG | M.SenLT1ORF4485P |
| 4490 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5305 | 95 aa hypothetical protein | |||
| 5310 | R | StyUK1MrrP (100% identity) | SenLT1MrrP | |
| 5315 | type I restriction-modification system | |||