Streptomyces scabiei 87.22 |
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Putative Streptomyces scabiei 87.22 RM systems
Ref: Yaxley,A. et al. unpublished
REBASE ref # 11376
Complete sequence: 10,148,695 bp
GenBank #: FN554889 (NC_013929)
REBASE acronym: Ssc87
Org_num: 5650
All begin SCAB_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 29181 | 242 aa conserved hypothetical protein | |||
| 29191 | M | M.Ssp1480ORF18060P (99% identity) | M.Ssc87ORF29191P | |
| 29201 | S | S.Ssp1480ORF18060P (54% identity) | S.Ssc87ORF29191P | |
| 29211 | R | Ssp1480ORF18060P (100% identity) | Ssc87ORF29191P | |
| 29221 | 240 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16031 | oxidoreductase. | |||
| 16041 | RM | Ssp0414ORF9430P (74% identity) | Ssc87ORF16041P | |
| 16061 | 361 aa conserved hypothetical protein | |||
| 16131 | helicase SNF2 family protein | |||
| 16141 | RM | Ssp481ORF6715P (81% identity) | Ssc87ORF16141P | |
| 16151 | 377 aa conserved hypothetical protein | |||
| 16391 | DNA helicase II | |||
| 16401 | M | M.Ssp1482ORF36000P (99% identity) | M.Ssc87ORF16401P | |
| 16411 | 819 aa conserved hypothetical protein | |||
| 21231 | helicase SNF2 family protein | |||
| 21241 | RM | Ssp1480ORF33175P (99% identity) | Ssc87ORF21241P | |
| 22161 | 183 aa conserved hypothetical protein | |||
| 22171 | M | M.Ssp1480ORF32710P (100% identity) | M.Ssc87ORF22171P | |
| 22181 | lipoprotein | |||
| 22541 | 290 aa conserved hypothetical protein | |||
| 22551 | M | M.Ssp1475ORF33155P (93% identity) | TGCGCA | M.Ssc87ORF22551P |
| 22561 | 376 aa conserved hypothetical protein | |||
| 29381 | regulatory protein | |||
| 29391 | M | M.Sal71ORF18700P (47% identity) | TCTAGA | M.Ssc87ORF29391P |
| 29392 | 259 aa conserved hypothetical protein | |||
| 32741 | 205 aa conserved hypothetical protein | |||
| 32751 | M | M.Ssp1482ORF29020P (100% identity) | M.Ssc87ORF32751P | |
| 32761 | lipoprotein | |||
| 33191 | 311 aa conserved hypothetical protein | |||
| 33201 | M | M.Ssp1480ORF27620P (100% identity) | TGCGCA | M.Ssc87ORF33201P |
| 33211 | 372 aa conserved hypothetical protein | |||
| 51691 | 404 aa conserved hypothetical protein | |||
| 51701 | RM | Ssp1480ORF18515P (100% identity) | Ssc87ORF51701P | |
| 51711 | membrane protein | |||
| 54341 | lipoprotein | |||
| 54351 | M | M.Ssp1482ORF17870P (100% identity) | M.Ssc87ORF54351P | |
| 54361 | integral membrane protein | |||
| 57131 | DNA-binding protein | |||
| 57141 | M | M.Sca33AORF27995P (89% identity) | GCCGGC | M.Ssc87ORF57141P |
| 57142 | V | V.Sca33AORF27995P (94% identity) | V.Ssc87ORF57141P | |
| 57151 | 336 aa conserved hypothetical protein | |||
| 60741 | 79 aa hypothetical protein | |||
| 60751 | M | M.SspM2AORFBP (80% identity) | M.Ssc87ORF60751P | |
| 60761 | 82 aa hypothetical protein | |||
| 65901 | 61 aa conserved hypothetical protein | |||
| 65911 | RM | Ssp1480ORF12450P (100% identity) | Ssc87ORF65911P | |
| 65921 | helicase SNF2 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16301 | 422 aa conserved hypothetical protein | |||
| 16321 | R | Ssp11x1McrB2P (93% identity) | Ssc87McrBP | |
| 16331 | R | Ssp11x1McrC2P (93% identity) | Ssc87McrCP | |
| 16341 | 545 aa conserved hypothetical protein | |||
| 16361 | 770 aa conserved hypothetical protein | |||
| 16371 | R | Ssp576McrB2P (91% identity) | Ssc87McrB2P | |
| 16381 | R | Ssp11x1McrCP (87% identity) | Ssc87McrC2P | |
| 16391 | DNA helicase II | |||
| 65961 | 206 aa hypothetical protein | |||
| 65971 | R | Ssp1482McrBP (100% identity) | Ssc87McrB3P | |
| 65981 | R | Ssp1482McrCP (100% identity) | Ssc87McrC3P | |
| 65991 | 210 aa conserved hypothetical protein | |||