Escherichia coli WCHEC96200 |
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Putative Escherichia coli WCHEC96200 RM systems
Ref: Zhang,X. et al. unpublished
REBASE ref # 24995
| Sequence length: | GenBank #: | |
| Chromosome: | 5,051,470 bp | CP022229 |
| plasmid pNDM4_WCHEC96200: | 45,476 bp | CP022226 |
| plasmid pOXA1_WCHEC96200: | 150,853 bp | CP022227 |
| plasmid p_WCHEC96200: | 92,538 bp | CP022228 |
REBASE acronym: Eco96200
Org_num: 25533
All begin DBR04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22455 | AAA family ATPase | |||
| 22450 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco96200ORFBP |
| 22445 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco96200ORFBP |
| 22440 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco96200ORFBP |
| 22435 | 65 aa hypothetical protein | |||
| 13605 | endoribonuclease SymE | |||
| 13600 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco96200ORFDP |
| 13595 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco96200ORFDP |
| 13590 | R | EcosS1ORF16790P (99% identity) | CCANNNNNNNCTTC | Eco96200ORFDP |
| 13585 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 27240 | 330 aa hypothetical protein | |||
| 27235 | M | M.Sbo812ORFEP (100% identity) | M.Eco96200ORFCP | |
| 27230 | replication endonuclease | |||
| 25640 | NinE family protein | |||
| 25635 | M | M.EcoWN4ORF7335P (100% identity) | GATC | M.Eco96200ORFHP |
| 25630 | recombination protein NinB | |||
| 20435 | DNA-binding transcriptional regulator Fis | |||
| 20430 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco96200ORFAP |
| 20425 | DUF2556 domain-containing protein | |||
| 19870 | ribulose-phosphate 3-epimerase | |||
| 19865 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco96200DamP |
| 19860 | cell division protein DamX | |||
| 1925 | drug/metabolite exporter YedA | |||
| 1920 | V | V.SflSTLE3DcmP (100% identity) | V.Eco96200DcmP | |
| 1915 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco96200DcmP |
| 1910 | HD domain-containing protein | |||
| plasmid pNDM4_WCHEC96200 | ||||
| 75 | IS66 family transposase | |||
| ??? | R | Sen23701ORF24490P (100% identity) | CCWGG | Eco96200ORFGP |
| ??? | M | M.Kpn9645ORFAP (99% identity) | CCWGG | M.Eco96200ORFGP |
| 90 | glycosyltransferase | |||
| plasmid pOXA1_WCHEC96200 | ||||
| 1200 | 73 aa hypothetical protein | |||
| 1205 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco96200ORFFP | |
| 1210 | 0 aa hypothetical protein | |||
| plasmid p_WCHEC96200 | ||||
| 1725 | recombination-associated protein RdgC | |||
| ??? | M | M.Eco444ORFKP (99% identity) | M.Eco96200ORFEP | |
| 1740 | 94 aa hypothetical protein | |||
| 1740 | 94 aa hypothetical protein | |||
| 1735 | M | M.Eco96200ORFEP (90% identity) | M.Eco96200ORF1735P | |
| 1730 | 226 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13590 | type I restriction-modification system | |||
| 13585 | R | EcosS1MrrP (100% identity) | Eco96200MrrP | |
| 13580 | GTPase | |||