Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO_STM2612 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO_STM2612 RM systems
Ref: Arabyan,N. et al. unpublished
REBASE ref # 24503
Contig set: 4,893,616 bp
GenBank #: MZNO00000000 (NZ_MZNO00000000)
REBASE acronym: Sen8422
Org_num: 24567
All begin B4421_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1165 | restriction endonuclease | |||
| 1170 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen8422ORF1175P |
| 1175 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen8422ORF1175P |
| 1180 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen8422ORF1175P |
| 1185 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2460 | amino acid exporter | |||
| 2465 | V | V.StyUK1DcmP (100% identity) | V.Sen8422DcmP | |
| 2470 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen8422DcmP |
| 2475 | phosphohydrolase | |||
| 19495 | Fis family transcriptional regulator | |||
| 19500 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8422ORF19500P |
| 19505 | DUF2556 domain-containing protein | |||
| 1345 | DNA repair protein | |||
| 1350 | RM | StyUK1IV (100% identity) | GATCAG | Sen8422ORF1350P |
| 1355 | 363 aa hypothetical protein | |||
| 4390 | 0 aa hypothetical protein | |||
| 4395 | M | M.StyUK1ORFAP (100% identity) | M.Sen8422ORF4395P | |
| 4400 | 73 aa hypothetical protein | |||
| 12755 | SPOR domain-containing protein | |||
| 12760 | M | M.StyTDamP (100% identity) | GATC | M.Sen8422DamP |
| 12765 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8845 | MFS transporter | |||
| 8850 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen8422ORF8850P |
| 8855 | R | StyUK1IP (99% identity) | CAGAG | Sen8422ORF8850P |
| 8860 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1160 | 95 aa hypothetical protein | |||
| 1165 | R | StyUK1MrrP (100% identity) | Sen8422MrrP | |
| 1170 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18965 | 75 aa hypothetical protein | |||
| 18970 | M | M.StyLTORF13745P (100% identity) | M.Sen8422ORF18970P | |
| 18975 | replication endonuclease from prophage-like | |||