Streptococcus pneumoniae TIGR4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptococcus pneumoniae TIGR4 RM systems
Ref: Tettelin,H. et al. Science 293 (5529), 498-506 (2001)
REBASE ref # 6890
Complete sequence: 2,160,842 bp
GenBank #: AE005672 (NC_003028)
REBASE acronym: Spn
Org_num: 3225
All begin SP_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 504 | 45 aa hypothetical protein | |||
| 505 | S | S3.Spns521IP (100% identity) | S1.SpnORF509P | |
| 506 | integrase/recombinase, phage integrase family | |||
| 507 | S | S1.Spnp2ORF4750P (34% identity) | S2.SpnORF509P | |
| 508 | S | S1.SpnXen35ORF2555P (100% identity) | S3.SpnORF509P | |
| 509 | M | M.SpnXen35ORF2555P (100% identity) | M.SpnORF509P | |
| 510 | R | SpnXen35ORF2555P (100% identity) | SpnORF509P | |
| 511 | 42 aa hypothetical protein | |||
| 885 | 388 aa hypothetical protein | |||
| 886 | M | M.SpnsD39dORF3010P (100% identity) | M.SpnORF886P | |
| 887 | S | S1.SpnXen35ORF4400P (100% identity) | S1.SpnORF886P | |
| 888 | 78 aa hypothetical protein | |||
| 889 | 137 aa hypothetical protein | |||
| 890 | integrase/recombinase, phage integrase family | |||
| 891 | S | S4.SpnGA22FORFCP (100% identity) | S2.SpnORF886P | |
| 892 | R | SpnXen35ORF4400P (97% identity) | SpnORF886P | |
| 893 | transcriptional repressor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1220 | L-lactate dehydrogenase | |||
| 1221 | RM | SpnXen35ORF6050BP (100% identity) | SpnORF1221AP | |
| 1222 | RM | Spns521IVA (100% identity) | SpnORF1221BP | |
| 1223 | 84 aa conserved hypothetical protein | |||
| 1335 | 62 aa hypothetical protein | |||
| 1336 | M | M.Spnd6c8ORF1114P (100% identity) | M.SpnORF1336P | |
| 1337 | IS1380-Spn1, transposase | |||
| 1429 | peptidase, U32 family | |||
| ??? | R | Spnp6ORF14300P (100% identity) | TCTAGA | SpnORF1431P |
| 1431 | M | M.Spnp6ORF14300P (100% identity) | TCTAGA | M.SpnORF1431P |
| 1432 | 48 aa hypothetical protein | |||
| 1849 | DpnD protein | |||
| 1850 | R | SpnsD39dORF3910P (100% identity) | GATC | SpnORF1850P |
| 1851 | 134 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1249 | guanosine monophosphate reductase | |||
| ??? | R | SpnXen35McrCP (100% identity) | SpnMcrCP | |
| 1251 | endonuclease | |||
| ??? | 447 aa hypothetical protein SPCG_1053 | |||
| 1251 | R | SpnXen35McrBP (99% identity) | SpnMcrBP | |
| 1252 | 56 aa hypothetical protein | |||