Escherichia coli UMDKSU-2013-3-109D |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli UMDKSU-2013-3-109D RM systems
Ref: Noll,L.W. et al. unpublished
REBASE ref # 24468
Contig set: 5,331,933 bp
GenBank #: MVLB00000000 (NZ_MVLB00000000)
REBASE acronym: Eco3109D
Org_num: 24491
All begin ORF_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M.Sfl9783ORF5079P (55% identity) | M.Eco3109DORFNP | |
| 5 | Antirepressor | |||
| 5 | Uncharacterized protein | |||
| 6 | R | EcoR811ORFEP (100% identity) | Eco3109DORFDP | |
| 7 | M | M.EcoB1109aORFBP (100% identity) | GCCGGC | M.Eco3109DORFDP |
| 10 | Uncharacterized protein | |||
| 13 | 61 aa hypothetical protein | |||
| 14 | M | M.EcoYB141ORF15470P (100% identity) | M.Eco3109DORFHP | |
| 16 | 101 aa hypothetical protein | |||
| 17 | Protein ninE | |||
| 19 | M | M.Eco3331CORFDP (97% identity) | GATC | M.Eco3109DORFIP |
| 10 | PaaX family protein | |||
| 12 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.Eco3109DORFFP |
| 16 | Crossover junction endodeoxyribonuclease rusA | |||
| 21 | 64 aa hypothetical protein | |||
| 24 | M | M.Eco4423ORFEP (100% identity) | GATC | M.Eco3109DORFMP |
| 60 | Uncharacterized protein | |||
| 64 | M | M.Ror023ORFAP (100% identity) | M.Eco3109DORFEP | |
| 66 | 84 aa hypothetical protein | |||
| 80 | Porin | |||
| 81 | M | M.Eco398BORFGP (100% identity) | M.Eco3109DORFJP | |
| 83 | 82 aa hypothetical protein | |||
| 95 | 60 aa hypothetical protein | |||
| 98 | M | M.Eco398BORFHP (100% identity) | GATC | M.Eco3109DORFKP |
| 102 | Uncharacterized protein | |||
| 237 | 73 aa hypothetical protein | |||
| 238 | M | M.Eco398BORFAP (100% identity) | M.Eco3109DORFAP | |
| 241 | 84 aa hypothetical protein | |||
| 539 | 98 aa hypothetical protein | |||
| 541 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco3109DORFBP |
| 542 | Inner membrane protein YhdU | |||
| 1063 | Uncharacterized inner membrane transporter YedA | |||
| 1064 | V | V.Eco398BDcmP (100% identity) | V.Eco3109DDcmP | |
| 1068 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco3109DDcmP |
| 1070 | Metal-dependent phosphohydrolase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 127 | Ribulose-phosphate 3-epimerase | |||
| 128 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3109DORFCP |
| 131 | Cell division protein DamX | |||