Escherichia coli UMDKSU-2014-5-330A |
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Putative Escherichia coli UMDKSU-2014-5-330A RM systems
Ref: Noll,L.W. et al. unpublished
REBASE ref # 24096
Contig set: 5,598,552 bp
GenBank #: MVMJ00000000 (NZ_MVMJ00000000)
REBASE acronym: Eco5330A
Org_num: 24278
All begin ORF_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3 | 60 aa hypothetical protein | |||
| 4 | M | M.Eco57CORFFP (100% identity) | M.Eco5330AORFFP | |
| 6 | 82 aa hypothetical protein | |||
| 2 | 101 aa hypothetical protein | |||
| 3 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco5330AORFGP | |
| 5 | 74 aa hypothetical protein | |||
| 7 | SOS-response repressor and protease LexA | |||
| 11 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco5330AORFLP |
| 15 | Uncharacterized protein | |||
| 8 | SOS-response repressor and protease LexA | |||
| 11 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.Eco5330AORFKP |
| 14 | Uncharacterized protein | |||
| 16 | Uncharacterized protein | |||
| 19 | M | M.EcoMEC0002ORF29305P (100% identity) | SAY | M.Eco5330AORFEP |
| 25 | Uncharacterized protein | |||
| 10 | Flagellar regulator flk | |||
| 12 | M | M.Eco5332AORFLP (100% identity) | M.Eco5330AORFJP | |
| 13 | 70 aa hypothetical protein | |||
| 37 | 64 aa hypothetical protein | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | M.Eco5330AORFIP | |
| 43 | recombination protein | |||
| 27 | P21 prophage-derived protein NinB | |||
| 29 | M | M.EcoS7380ORFIP (100% identity) | M.Eco5330AORFDP | |
| 33 | Protein ninE | |||
| 21 | Recombination-associated protein RdgC | |||
| 24 | M | M.Eco5332AORFJP (100% identity) | M.Eco5330AORFHP | |
| 31 | Uncharacterized protein | |||
| 27 | Inner membrane protein YhdU | |||
| 28 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco5330AORFAP |
| 30 | 98 aa hypothetical protein | |||
| 29 | HD domain protein | |||
| 30 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco5330ADcmP |
| 32 | V | V.Sdy49550DcmP (100% identity) | V.Eco5330ADcmP | |
| 36 | Uncharacterized inner membrane transporter YedA | |||
| 103 | Uncharacterized protein | |||
| 104 | M | M.Sfl426ORFAP (100% identity) | M.Eco5330AORFCP | |
| 107 | R | EcoST9532ORF19285P (100% identity) | Eco5330AORFCP | |
| 108 | SsrA-binding protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 124 | Ribulose-phosphate 3-epimerase | |||
| 125 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5330AORFBP |
| 128 | Cell division protein DamX | |||