Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM0928 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM0928 RM systems
Ref: Arabyan,N. et al. unpublished
REBASE ref # 24077
Contig set: 4,893,594 bp
GenBank #: MWQW00000000 (NZ_MWQW00000000)
REBASE acronym: Sen8442
Org_num: 24183
All begin A9Q19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19110 | 110 aa hypothetical protein | |||
| 19115 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen8442ORF19120P |
| 19120 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen8442ORF19120P |
| 19125 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen8442ORF19120P |
| 19130 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23185 | DUF2556 domain-containing protein | |||
| 23190 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8442ORF23190P |
| 23195 | Fis family transcriptional regulator | |||
| 4940 | 0 aa hypothetical protein | |||
| 4945 | M | M.StyUK1ORFAP (100% identity) | M.Sen8442ORF4945P | |
| 4950 | 73 aa hypothetical protein | |||
| 18940 | 363 aa hypothetical protein | |||
| 18945 | RM | StyUK1IV (100% identity) | GATCAG | Sen8442ORF18945P |
| 18950 | DNA repair protein | |||
| 13870 | phosphohydrolase | |||
| 13875 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen8442DcmP |
| 13880 | V | V.StyUK1DcmP (100% identity) | V.Sen8442DcmP | |
| 13885 | amino acid exporter | |||
| 7230 | SPOR domain-containing protein | |||
| 7235 | M | M.StyTDamP (100% identity) | GATC | M.Sen8442DamP |
| 7240 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15945 | MFS transporter | |||
| 15950 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen8442ORF15950P |
| 15955 | R | StyUK1IP (99% identity) | CAGAG | Sen8442ORF15950P |
| 15960 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19125 | type I restriction-modification system | |||
| 19130 | R | StyUK1MrrP (100% identity) | Sen8442Mrr2P | |
| 19135 | 95 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7600 | replication endonuclease from prophage-like | |||
| 7605 | M | M.StyLTORF13745P (100% identity) | M.Sen8442ORF7605P | |
| 7610 | 75 aa hypothetical protein | |||