Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM1252 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM1252 RM systems
Ref: Arabyan,N. and Weimer,B.C. unpublished
REBASE ref # 24077
Contig set: 4,894,046 bp
GenBank #: MWQV00000000 (NZ_MWQV00000000)
REBASE acronym: Sen8441
Org_num: 24182
All begin A9Q18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18345 | restriction endonuclease | |||
| 18350 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen8441ORF18355P |
| 18355 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen8441ORF18355P |
| 18360 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen8441ORF18355P |
| 18365 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7170 | DUF2556 domain-containing protein | |||
| 7175 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8441ORF7175P |
| 7180 | Fis family transcriptional regulator | |||
| 1910 | 73 aa hypothetical protein | |||
| 1915 | M | M.StyUK1ORFAP (100% identity) | M.Sen8441ORF1915P | |
| 1920 | 0 aa hypothetical protein | |||
| 11420 | amino acid exporter | |||
| 11425 | V | V.StyUK1DcmP (100% identity) | V.Sen8441DcmP | |
| 11430 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen8441DcmP |
| 11435 | phosphohydrolase | |||
| 18525 | DNA repair protein | |||
| 18530 | RM | StyUK1IV (100% identity) | GATCAG | Sen8441ORF18530P |
| 18535 | 363 aa hypothetical protein | |||
| 14565 | SPOR domain-containing protein | |||
| 14570 | M | M.StyTDamP (100% identity) | GATC | M.Sen8441DamP |
| 14575 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16675 | 33 aa hypothetical protein | |||
| 16680 | R | StyUK1IP (99% identity) | CAGAG | Sen8441ORF16685P |
| 16685 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen8441ORF16685P |
| 16690 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18340 | 95 aa hypothetical protein | |||
| 18345 | R | StyUK1MrrP (100% identity) | Sen8441Mrr2P | |
| 18350 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1465 | 75 aa hypothetical protein | |||
| 1470 | M | M.StyLTORF13745P (100% identity) | M.Sen8441ORF1470P | |
| 1475 | replication endonuclease from prophage-like | |||