Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM4298::STM0928 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM4298::STM0928 RM systems
Ref: Arabyan,N. et al. unpublished
REBASE ref # 24077
Contig set: 4,870,368 bp
GenBank #: MWQS00000000 (NZ_MWQS00000000)
REBASE acronym: Sen4298
Org_num: 24179
All begin B4O65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18770 | restriction endonuclease | |||
| 18775 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen4298ORF18780P |
| 18780 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4298ORF18780P |
| 18785 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4298ORF18780P |
| 18790 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23460 | DUF2556 domain-containing protein | |||
| 23465 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4298ORF23465P |
| 23470 | Fis family transcriptional regulator | |||
| 21175 | 73 aa hypothetical protein | |||
| 21180 | M | M.StyUK1ORFAP (100% identity) | M.Sen4298ORF21180P | |
| 21185 | 0 aa hypothetical protein | |||
| 18950 | DNA repair protein | |||
| 18955 | RM | StyUK1IV (100% identity) | GATCAG | Sen4298ORF18955P |
| 18960 | 363 aa hypothetical protein | |||
| 2195 | phosphohydrolase | |||
| 2200 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen4298DcmP |
| 2205 | V | V.StyUK1DcmP (100% identity) | V.Sen4298DcmP | |
| 2210 | amino acid exporter | |||
| 9615 | SPOR domain-containing protein | |||
| 9620 | M | M.StyTDamP (100% identity) | GATC | M.Sen4298DamP |
| 9625 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14910 | MFS transporter | |||
| 14915 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen4298ORF14915P |
| 14920 | R | StyUK1IP (99% identity) | CAGAG | Sen4298ORF14915P |
| 14925 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18765 | 95 aa hypothetical protein | |||
| 18770 | R | StyUK1MrrP (100% identity) | Sen4298Mrr2P | |
| 18775 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 590 | replication endonuclease from prophage-like | |||
| 595 | M | M.StyLTORF13745P (100% identity) | M.Sen4298ORF595P | |
| 600 | 75 aa hypothetical protein | |||