Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM3338 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium LT2 KO STM3338 RM systems
Ref: Arabyan,N. et al. unpublished
REBASE ref # 24077
Contig set: 4,894,423 bp
GenBank #: MWQQ00000000 (NZ_MWQQ00000000)
REBASE acronym: Sen3338
Org_num: 24176
All begin B4O03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13065 | restriction endonuclease | |||
| 13070 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen3338ORF13075P |
| 13075 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen3338ORF13075P |
| 13080 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen3338ORF13075P |
| 13085 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3810 | ribulose-phosphate 3-epimerase | |||
| 3815 | M | M.StyTDamP (100% identity) | GATC | M.Sen3338DamP |
| 3820 | SPOR domain-containing protein | |||
| 17155 | Fis family transcriptional regulator | |||
| 17160 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen3338ORF17160P |
| 17165 | DUF2556 domain-containing protein | |||
| 14725 | 0 aa hypothetical protein | |||
| 14730 | M | M.StyUK1ORFAP (100% identity) | M.Sen3338ORF14730P | |
| 14735 | 73 aa hypothetical protein | |||
| 16000 | phosphohydrolase | |||
| 16005 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen3338DcmP |
| 16010 | V | V.StyUK1DcmP (100% identity) | V.Sen3338DcmP | |
| 16015 | amino acid exporter | |||
| 13245 | DNA repair protein | |||
| 13250 | RM | StyUK1IV (100% identity) | GATCAG | Sen3338ORF13250P |
| 13255 | 363 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3615 | 33 aa hypothetical protein | |||
| 3620 | R | StyUK1IP (99% identity) | CAGAG | Sen3338ORF3625P |
| 3625 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen3338ORF3625P |
| 3630 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13060 | 95 aa hypothetical protein | |||
| 13065 | R | StyUK1MrrP (100% identity) | Sen3338Mrr2P | |
| 13070 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23605 | 75 aa hypothetical protein | |||
| 23610 | M | M.StyLTORF13745P (100% identity) | M.Sen3338ORF23610P | |
| 23615 | replication endonuclease from prophage-like | |||