Shigella boydii BCW_4868 |
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Putative Shigella boydii BCW_4868 RM systems
Ref: Weis,A.M. and Weimer,B.C. unpublished
REBASE ref # 23975
Contig set: 4,863,104 bp
GenBank #: MSJS00000000 (NZ_MSJS00000000)
REBASE acronym: Sbo4868
Org_num: 23816
All begin AJR17_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 26915 | TrmB family transcriptional regulator | |||
| 26920 | M | DNA adenine methylase | M.Sbo4868ORF26920P | |
| 4230 | anti-adapter protein IraM | |||
| 4250 | M | M.EcoS6400ORFHP (98% identity) | M.Sbo4868ORF4250P | |
| 4255 | TrmB family transcriptional regulator | |||
| 26385 | 145 aa hypothetical protein | |||
| 26390 | M | M.EfeC18ORF5895P (99% identity) | M.Sbo4868ORF26390P | |
| 26395 | transcriptional regulator | |||
| 26275 | 103 aa hypothetical protein | |||
| 26280 | M | M.SensS499ORF26615P (99% identity) | M.Sbo4868ORF26280P | |
| 26285 | 73 aa hypothetical protein | |||
| 26035 | 0 aa hypothetical protein | |||
| 26040 | M | DNA methylase | M.Sbo4868ORF26040P | |
| 26045 | 73 aa hypothetical protein | |||
| 10645 | 164 aa hypothetical protein | |||
| 10650 | M | M.EcoB349aTORF18105P (100% identity) | GATC | M.Sbo4868ORF10650P |
| 10655 | LexA family transcriptional regulator | |||
| 21880 | protein ninB | |||
| 21885 | M | M.EcoLR641ORF13390P (99% identity) | GATC | M.Sbo4868ORF21885P |
| 21890 | protein ninE | |||
| 3560 | phosphohydrolase | |||
| 3565 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Sbo4868DcmP |
| 3570 | V | V.SdySWHE2DcmP (100% identity) | V.Sbo4868DcmP | |
| 3575 | drug/metabolite exporter YedA | |||
| 2815 | transporter | |||
| 2820 | M | M.Ecou015ORF2460P (99% identity) | ATGCAT | M.Sbo4868ORF2820P |
| 2825 | Fis family transcriptional regulator | |||
| 11630 | protein kinase | |||
| 11635 | S | S.EcoEC11ORF11815P (100% identity) | S.Sbo4868ORF11640P | |
| 11640 | M | M2.EcoTX1999ORF5114P (99% identity) | M1.Sbo4868ORF11640P | |
| 11645 | M | M1.EcoTX1999ORF5114P (98% identity) | M2.Sbo4868ORF11640P | |
| 11650 | helix-turn-helix domain-containing protein | |||
| 8850 | 61 aa hypothetical protein | |||
| 8855 | M | M.EcoSO173ORF23940P (98% identity) | M.Sbo4868ORF8855P | |
| 8860 | dimethyl sulfoxide reductase | |||
| 505 | cell division protein DamX | |||
| 510 | M | M.SspPIBDamP (100% identity) | GATC | M.Sbo4868DamP |
| 515 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14495 | R | restriction endonuclease | Sbo4868ORF14500AP | |
| 14500 | M | M.SenL0047ORF24180P (100% identity) | M.Sbo4868ORF14500P | |
| 14505 | RNA polymerase | |||
| 14510 | 77 aa hypothetical protein | |||
| 14515 | SocE | |||
| 14520 | 0 aa hypothetical protein | |||
| 14525 | R | restriction endonuclease | Sbo4868ORF14500BP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18730 | formate acetyltransferase | |||
| 18735 | R | Eal3866ORFFP (99% identity) | YCGR | Sbo4868ORF18735P |
| 18740 | DNA-invertase | |||