Escherichia coli O157 FDAARGOS_293 |
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Putative Escherichia coli O157 FDAARGOS_293 RM systems
Ref: Goldberg,B. et al. unpublished
REBASE ref # 24775
| Sequence length: | GenBank #: | |
| Chromosome: | 5,548,751 bp | CP022050 |
| plasmid unnamed2: | 95,288 bp | CP022052 |
REBASE acronym: Eco293
Org_num: 25044
All begin CEP72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9110 | DUF262 domain-containing protein | |||
| 9115 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco293IP |
| 9120 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco293I |
| 9125 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco293I |
| 9130 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 975 | drug/metabolite exporter YedA | |||
| 980 | V | V.EcosPA8DcmP (100% identity) | V.Eco293DcmP | |
| 985 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco293DcmP |
| 990 | phosphohydrolase | |||
| 1925 | NinE family protein | |||
| 1930 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco293ORF1930P |
| 1935 | recombination protein NinB | |||
| 9375 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco293II |
| 9380 | ATP-dependent helicase | |||
| 9410 | N-acetylneuraminate epimerase | |||
| 9415 | R | Ecos1613ORF26795P (100% identity) | Eco293ORF9415P | |
| 9420 | IS3 family transposase | |||
| 10740 | Eae protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco293ORFAP | |
| 10755 | 65 aa hypothetical protein | |||
| 15335 | protein DamX | |||
| 15340 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco293DamP |
| 15345 | ribulose-phosphate 3-epimerase | |||
| 15885 | DUF2556 domain-containing protein | |||
| 15890 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco293ORF15890P |
| 15895 | Fis family transcriptional regulator | |||
| 22045 | PerC family transcriptional regulator | |||
| 22050 | M | M.Eco2205ORFHP (100% identity) | GATC | M.Eco293ORF22050P |
| 22055 | LexA family transcriptional regulator | |||
| 25365 | lipoprotein | |||
| 25370 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco293ORF25370P | |
| 25385 | 61 aa hypothetical protein | |||
| 25795 | TrmB family transcriptional regulator | |||
| 25800 | M | M.EcoTWORF1742P (100% identity) | M.Eco293ORF25800P | |
| 25810 | DUF1737 domain-containing protein | |||
| plasmid unnamed2 | ||||
| 30350 | 73 aa hypothetical protein | |||
| 30355 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco293ORF30355P | |
| 30360 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9130 | endoribonuclease SymE | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco293GmrDP | |
| 9140 | R | Ecos1613GmrSP (100% identity) | Eco293GmrSP | |
| 9145 | DUF1127 domain-containing protein | |||