Salmonella enterica subsp. enterica serovar Typhi 430040 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhi 430040 RM systems
Ref: Rodrigues,C. et al. unpublished
REBASE ref # 23692
GenBank #: MQUM00000000
REBASE acronym: Sen430040
Org_num: 23025
All begin BST88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14340 | restriction endonuclease | |||
| 14345 | R | Sen82356ORFJP (100% identity) | GAANNNNNNNNTCGC | Sen430040ORF14350P |
| ??? | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen430040ORF14350P |
| 14355 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen430040ORF14350P |
| 14360 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22580 | DUF2556 domain-containing protein | |||
| 22585 | M | M.StyUK1III (100% identity) | M.Sen430040ORF22585P | |
| 22590 | Fis family transcriptional regulator | |||
| 17305 | endonuclease | |||
| 17310 | M | M.StyTORF4329P (100% identity) | M.Sen430040ORF17310P | |
| 17315 | DNA polymerase III subunit epsilon | |||
| 2845 | ribulose-phosphate 3-epimerase | |||
| 2850 | M | M.StyTDamP (100% identity) | GATC | M.Sen430040DamP |
| 2855 | cell division protein DamX | |||
| 18485 | 75 aa hypothetical protein | |||
| 18490 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen430040ORF18490P |
| 18495 | endonuclease | |||
| 5300 | replication protein A | |||
| 5305 | M | M.Sen82356ORFDP (100% identity) | M.Sen430040ORF5305P | |
| 5310 | 77 aa hypothetical protein | |||
| 8005 | 79 aa hypothetical protein | |||
| 8010 | M | M.StyTORF1926P (100% identity) | M.Sen430040ORF8010P | |
| 8015 | 354 aa hypothetical protein | |||
| 8070 | 174 aa hypothetical protein | |||
| 8075 | M | M.StyTORF1914P (100% identity) | M.Sen430040ORF8075P | |
| 8080 | 190 aa hypothetical protein | |||
| 1135 | drug/metabolite exporter YedA | |||
| 1140 | V | V.StyTDcmP (100% identity) | V.Sen430040DcmP | |
| 1145 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen430040DcmP |
| 1150 | phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11755 | MFS transporter | |||
| 11760 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen430040ORF11760P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen430040ORF11760P |
| 11775 | 33 aa hypothetical protein | |||
| 1230 | SpnT protein | |||
| 1235 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen430040ORF1235P | |
| 1240 | R | StyTORF872P (100% identity) | Sen430040ORF1235P | |
| 1245 | pilus assembly protein PilV | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14335 | 95 aa hypothetical protein | |||
| 14340 | R | StyTMrrP (100% identity) | Sen430040MrrP | |
| 14345 | type I restriction-modification system | |||