Propionibacterium freudenreichii CIRM-BIA 456 |
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Putative Propionibacterium freudenreichii CIRM-BIA 456 RM systems
Ref: Falentin,Helene unpublished
REBASE ref # 23849
Contig set: 2,500,280 bp
GenBank #: CDAG00000000 (NZ_CDAG00000000)
REBASE acronym: Pfr456
Org_num: 22981
All begin PFCIRM456_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8980 | 366 aa Hypothetical protein | |||
| 8985 | R | PfrP19ORFDP (100% identity) | Pfr456ORF8995P | |
| ??? | S | S.PfrM32ORFBP (100% identity) | S.Pfr456ORF8995P | |
| 8995 | M | M.Pfr19025ORF2120P (99% identity) | M.Pfr456ORF8995P | |
| 9000 | Protein of unknown function | |||
| 3550 | ABC 2 protein of drug ABC transporter | |||
| 3555 | M | M.PfrP1ORF11000P (100% identity) | M.Pfr456ORF3555P | |
| 3560 | S | S2.Pfr516ORF9435P (95% identity) | S1.Pfr456ORF3555P | |
| 3565 | S | S.PfrPBF13ORFFP (24% identity) | S2.Pfr456ORF3555P | |
| 3570 | R | PfrPBF04ORFDP (99% identity) | Pfr456ORF3555P | |
| 3575 | Protein of unknown function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6630 | M | M.MspRG1ORF10905P (82% identity) | M.Pfr456ORF6630P | |
| 6635 | Transcriptionnal regulator | |||
| 6640 | R | MspRG1ORF10905P (85% identity) | Pfr456ORF6630P | |
| 6645 | Protein of unknown function | |||
| 1630 | uncharacterized protein | |||
| 1635 | R | PfrJS12bORF27P (71% identity) | Pfr456ORF1645P | |
| 1640 | Sir2-family regulator | |||
| ??? | M | M.PfrJS12bORF27P (100% identity) | CTCGAG | M.Pfr456ORF1645P |
| 1650 | Protein of unknown function | |||
| 10 | M | M.Ssp23231ORF2423P (45% identity) | M.Pfr456ORF10P | |
| 15 | R | SsuL180ORFDP (51% identity) | Pfr456ORF10P | |
| 20 | Protein of unknown function | |||
| 6780 | Protein of unknown function | |||
| ??? | RM | Pfr119ORF65P (44% identity) | Pfr456ORFAP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5780 | Multi antimicrobial extrusion protein MatE | |||
| 5785 | R | PfrUF1Mrr2P (100% identity) | Pfr456MrrP | |
| 5790 | 297 aa Hypothetical protein | |||
| 6015 | 97 aa Hypothetical protein | |||
| 6020 | R | PfrP1ORF12395P (100% identity) | Pfr456ORF6020P | |
| 6025 | Anaerobic C4-dicarboxylate transporter | |||